Merops nubicus (carmine bee-eater): 103768301
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Entry
103768301 CDS
T08417
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103768301 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnb03041
]
103768301 (SF3B1)
03036 Chromosome and associated proteins [BR:
mnb03036
]
103768301 (SF3B1)
Spliceosome [BR:
mnb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103768301 (SF3B1)
Complex B
103768301 (SF3B1)
Complex C
U2 SnRNP specific factors
103768301 (SF3B1)
Chromosome and associated proteins [BR:
mnb03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103768301 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
103768301
NCBI-ProteinID:
XP_008933690
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MSITLCVHVKKTLIFFFFVFTLDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGS
DSRFAGYVTSIAATELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHR
PQKIADREDEYKKHRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREI
RQQLAEKAKAGELKVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPS
LRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARK
NRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGST
PVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPE
GYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPD
DIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGP
LFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR
VEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA
VCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIA
ALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVM
LILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNY
RQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEE
QLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQ
AADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMT
PPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHK
KAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLP
ALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASA
VVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYC
LQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgagtattacattgtgtgtacatgtaaaaaaaaccctgattttttttttttttgtcttt
accctagatattgaagcacagattcgagaaattcaaggcaaaaagcctgctcttgatgaa
gcacaaggagtaggccttgattccacaggatattatgatcaagaaatttatggtggcagt
gacagcagatttgctggatatgtcacttctattgcagcaactgaattggaagatgatgat
gatgactacccctctacaagtttgcttggccagaagaagccaggataccatgctccagtg
gcattgcttaatgacataccacagtctactgaacagtatgatccttttgcagaacaccgt
cctcagaagatcgcggaccgggaagatgagtacaaaaagcacaggcggatgatgataatt
tcccctgagcgtcttgatccttttgcagatggagggaagacaccagatcctaaaatgaat
gccagaacgtacatggatgttatgcgtgaacagcatttaacaaaagaagagagggaaatt
aggcaacaactagctgagaaagctaaagctggagagcttaaagtcgtcaatggagccgca
tctcagccaccttcaaaacgcaagcggcgttgggatcagacagctgatcagactcctggt
gccacacctaaaaaactgtccagctgggatcaagcagagactcctggacataccccatcc
ctgcgctgggatgaaactccaggccgtgcaaagggcagtgaaactccgggtgccaccccc
ggctccaagatctgggatcccactcccagtcacacgccagcaggagctgccacgccaggg
cgggacacgccaggacatgccacaccaggccacggaggtgccacctccagcgcgcggaag
aaccgctgggatgaaacgcccaagacagaacgagatactccgggacacggcagcgggtgg
gctgagacgcctcgtaccgataggggcggtgactccatcggggagacaccaaccccggga
gcaagcaaaagaaagtcccgctgggatgaaacgcctgccagccagatgggtggcagcact
cctgttctgacacctggcaaaacacccattggtacaccagctatgaacatggcaactcct
acaccaggtcatataatgagcatgactcctgagcagctgcaggcgtggcgctgggaaagg
gaaatagatgagagaaacagaccactttctgatgaagaattggatgctatgtttccagaa
ggctataaggtccttcccccaccagctggttacgtgcctatccgcactccagcccgtaag
ctgacggcgactccaaccccgttgggtggcatgactgggttccacatgcagacagaagac
cggactatgaagagtgttaatgaccagccatctggcaatcttccattcctaaaaccagat
gatatccagtactttgataaactgctggttgatgttgatgaatcaactttgagtcccgaa
gaacagaaggagagaaaaataatgaaattgcttctgaaaataaagaacggcacacctcct
atgaggaaggctgcgttgcgacagattacagataaagctcgtgaatttggggccgggccg
ttgtttaatcagattctgcctttgctgatgtcaccaacccttgaagatcaggagcgtcac
ttgcttgtcaaagtcattgacagaattctttacaaactggatgacttggtccgaccatat
gtacacaagatccttgtcgtcatcgaaccattgctgattgatgaagactactatgccaga
gtggagggcagagaaattatttcaaacttggctaaggctgctggtctggccacaatgatc
tccacgatgcgacctgatattgacaatatggatgagtacgtgcgaaacacgacagctcga
gcctttgctgttgttgcctctgccctgggcattccttctctcttacccttcttgaaagct
gtctgtaaaagcaagaaatcctggcaggccaggcatactggcatcaagattgtccagcag
attgctattcttatgggctgtgctatcttgcctcacctcaggagcttggttgaaattatt
gaacatggtctggtggatgagcagcagaaagttcgcaccatcagtgctttggctatcgct
gctttggctgaggcagccactccctatggtattgaatcatttgattctgttctgaagcct
ttatggaagggtatacgtcaacacagaggaaagggtttggctgcctttttgaaggctatt
ggttacctgattccactcatggatgctgagtatgccaactactacaccagagaagtcatg
ctaatccttatcagagagttccagtctcctgatgaagagatgaaaaaaattgtgctgaag
gtggtgaagcagtgttgtggtacagacggtgttgaagcaaactacatcaaaacagaaatc
ttgccaccttttttcaaacacttctggcagcacagaatggcattggacagaagaaattac
agacagttggttgatacaactgtggagctggcaaataaagttggagcagcagaaattatt
tctagaattgtggatgatctgaaagatgaggctgaacagtacagaaaaatggtcatggaa
acaattgagaagataatgggaaacctaggggctgcagacattgatcataagctggaagaa
caactgattgatggtatcttgtatgccttccaggagcagaccacagaggattctgtgatg
ctgaatggttttggcacagtggttaatgctttaggcaaaagagtgaaaccctacttgcca
cagatctgtggtacagttttgtggcgtttgaacaacaagtcagccaaagttaggcagcag
gctgctgacctgatctctcgtactgcagttgtcatgaagacctgtcaagaggaaaaactg
atgggacacttgggcgtggtgttgtatgagtacctgggtgaagaatatcctgaagtactg
ggcagcatccttggagcacttaaggctattgtgaatgttataggtatgcacaagatgaca
ccaccaatcaaagatctgctgccacggcttacacccattttgaagaacaggcatgagaaa
gtgcaggagaactgtattgatcttgttgggcgcattgcagaccgaggtgcagaatatgtt
tctgcaagagagtggatgaggatctgctttgaactgcttgaattattaaaagctcacaag
aaagctatccgaagagccacagtgaacacttttggttacattgcaaaagctattggacct
cacgatgtattggctacgctactaaataacctgaaagtacaggaaaggcagaacagagta
tgtactacagtagcaattgctattgtagctgaaacatgctcacccttcacagtgctgcct
gcactcatgaatgaatacagagttccagaactgaatgtccagaatggtgtgctaaaatct
ctctctttcctgtttgaatacattggagagatgggcaaagattacatttatgctgttaca
ccattgcttgaagatgctttaatggacagggatcttgtacacagacaaacagccagtgct
gtggtgcagcacatgtcccttggtgtttatgggtttggctgtgaagattctcttaatcat
ttgttaaattatgtgtggcccaatgtgtttgaaacctcacctcacgtcattcaggccgtt
atgggggccctggagggcctcagggttgccattggtccctgcagaatgttgcagtattgt
ttacagggtttgtttcaccctgccaggaaagtcagagatgtttattggaagatttataac
tcgatctacatcggctcacaggacgctctgatagcacattatccaagaatctataacgat
gaaaagaacacctatattcgttatgaacttgattacatcttataa
DBGET
integrated database retrieval system
