Merops nubicus (carmine bee-eater): 103768350
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Entry
103768350 CDS
T08417
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnb03019
]
103768350 (TNRC6C)
03036 Chromosome and associated proteins [BR:
mnb03036
]
103768350 (TNRC6C)
Messenger RNA biogenesis [BR:
mnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103768350 (TNRC6C)
Chromosome and associated proteins [BR:
mnb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103768350 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
103768350
NCBI-ProteinID:
XP_008933739
LinkDB
All DBs
Position
Unknown
AA seq
1719 aa
AA seq
DB search
MVGRLLSSDLSHSGLGDHYENSHWGQQPAFRSEGNCSWDKVIIDRTDKEAWPSITGAETE
SASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGALVQSTSNQSALGA
GGANGNGNSARVWGVAAGSSSGLAHCSASGGDGKMDTMMGDGRSQNCWGASNSNAGINLN
LNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQES
TEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIP
PHLQGLPGANGTAASQVSGGSGEGLGSSVWGMSPGNPATGNSNSGFSQGNGDTVNSALSA
KQNGSSSAVQKEGNGASAWDSGPPSGPGVLAWGRGGGSSGVGSMHSGAWGHPNRNTSNGV
NGEWGKPPNQHSNSDVNGKGSAGWDSSSVTSPSPAAQQGSEQMNSWAKAAATGTTASEGS
NDSSGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTA
WEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGWVNSPPAAVPT
NTGWGDNNNKAPNGPGGWGESASSTTVNNAAAAKSGHAWSGSANQEDKSPTWGEPQKPKS
QNWGDGQKSNPSWTSGGGDWTDSSSVPGHMGDGKKNGSGWDSDNRSGSGWNDSTRSGTSG
WGNGTNSKVNTGTSWGESLKPGPQQNWANKPQDNNVSNWGGAASVKQTGSGWVGGPVPAK
QKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPIIQSSTTTNT
TTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPVSTGWGEMPTVHTKSEASWGEPSSPSAA
VDNGTSAWGKPPSSGTGWGENPAEPAGTYGRTNPPAAAPALCKPASKSMQEGWGSGGDEV
NLSTSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQ
LTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPP
ISKESSMDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNL
NSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLL
QFAAKNIGLSPAQLTSPINNPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQ
EQQVARTINNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHPQAPGL
PDLQTKEQQSSPNTFAPYPLAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTHPNSMD
NLSSAASSLDQNSSKHGAIPGGLSIGPPGKSSIDDSYSRYDLMQNSESPASPPVAVPHSW
SRAKTDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDV
NRYLLKSGGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSG
PISHTQASLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSAWSTDS
SGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKS
LHMCVLGNTTILAEFAGEEEVNRFLAQGQALPPTSSWQS
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggttgggcggctcctttcttcagatctcagccacagtggattgggagaccattatgag
aattcccactggggacagcagcccgctttccggagtgaaggcaactgcagctgggataaa
gtgataatagacaggactgacaaggaagcgtggccttccattactggagccgagactgag
tctgcctcagaatgtactacagacactgactctgcctccaactgtggctcagagaacagt
agcatggctacagggagtgcccaaggcaacttcactggacatacaaagaaaactaatggc
aataatggcgccaacggagcactcgtccaaagcacttctaaccagagtgcccttggagct
ggtggagcaaacggtaacggcaactcggccagagtgtggggagtggctgcgggctccagc
tctggcctagctcactgctctgccagtggtggggatggaaagatggacaccatgatggga
gatggtagaagtcagaactgctggggtgcttccaactcgaatgctggcattaatcttaac
cttaaccctaatgccaatccggctgcctggcctgtacttggacatgaaggaactgtggga
gcaggcaacccttccagtatttgcagtccagtcagtgccataggtcagaacatgggcaac
cagaatgggaacccaacaggcaccttaggtgcttggggaaacttgctgccgcaagagagc
acagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaacctt
aacactgatggaccaaataacactaaccccatgaactcttcaccaaaccctatcaatgca
atgcagacaaacggactgccgaactgggggatggccgttggtatgggggccatcatcccg
ccccacctgcaaggccttcctggtgctaacggaacagcggcttctcaagtcagcgggggc
agtggtgaaggattgggcagttcagtgtgggggatgtccccaggtaatcctgccacagga
aacagcaattctgggttcagtcaggggaatggagacactgtgaactcagcattaagtgct
aaacaaaacggatccagcagcgctgtgcaaaaggaagggaacggagcaagcgcgtgggat
tcggggcctccttctgggcctggggtactggcgtggggcaggggcggtggcagcagcggt
gtcggtagcatgcattctggagcttggggccaccccaaccgtaacaccagtaacggtgtc
aacggagaatggggcaagcccccgaaccagcattccaatagtgacgtcaacgggaaagga
tccgcagggtgggacagctcgagcgtcaccagtcccagtcctgccgcgcagcagggcagc
gaacaaatgaactcttgggccaaagctgcggcgactggcaccacagctagcgaaggaagc
aacgacagcagtgggagccaaaacgaaggcagtactgggagggagggggctggagagggc
aggaggagagacaaagggatgatagaccaagggcaggttcagttgccaagaaatgacctt
gaccccagggtcctgtccaatacggggtggggacagacccctgtaaagcaaaacactgcc
tgggaatttgaagagtccccaaggtccgaacgaaagaatgacaatggaacagaggcctgg
ggttgtgcagctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaac
agtacaaatacctcttcagtatctgggtgggtcaactctccaccggcagctgtcccaaca
aatacaggttggggagacaataacaacaaagcaccaaatggcccagggggttggggagag
tcagcaagctctactactgttaataatgctgctgctgccaaaagcggccacgcgtggagt
gggtccgcaaatcaggaggacaaatcacctacctggggtgaacctcagaaacccaaatct
caaaactggggagatggacaaaaatcaaatccaagctggacttcaggaggtggagattgg
acagattcatcgtcagttcctggacacatgggtgatgggaagaagaatggatctggatgg
gattctgacaatagatcagggtctggctggaatgattccacgaggtctgggaccagtggg
tggggaaatggcacaaacagcaaggtgaatacaggtacaagttggggggaatctttaaag
ccaggcccccaacaaaactgggctaataaaccccaggacaacaatgtgagtaactgggga
ggagctgcttctgtaaaacagacggggtcagggtgggttggtgggccagtgccagccaaa
caaaaagagaactgtgaggcaactggctgggaagagccatctccaccgtccattcgccgc
aagatggaaatcgatgatggtacctcagcttggggcgacccaaattacaacaacaacaag
actgtaaacatgtgggatagaaataatcctataattcagagcagtaccacaaccaacacc
accaccactagcaccattatcaacacaaacatggttgaacctcagccatcacaccagtca
agtgcccagccgaaccggtccccgctgcttggtccagtttccacaggctggggtgaaatg
cctactgtccacacaaagagcgaagcttcttggggagagccgtcatccccttctgctgca
gttgataatggcacttcagcgtgggggaaaccccccagcagtgggacagggtggggagag
aatcctgccgagccggcggggacctacggcagaacaaaccctccagctgctgccccagca
ctgtgcaaaccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgaagtg
aatctcagtactagtcagtgggaagatgaggaaggagatatgtggaataatactgcttca
caagagagtagctcctcctgtaattcctgggggaacgccccgaagaaaggacttcaaaag
ggcatgaagacatctagcaagcaagatgaggcctggatcatgaaccgcctgataaaacag
ctcacagacatgggcttccccagagagccagcggaagaggccttgaagagcaacaatatg
aatcttgatcaggccatgagtgctctgctggaaaagaaggtggaaatggacaagcgtgga
atgggagtgaccgactataatggaatggtcaccaaaccccttggctgccgcccaccacca
atctccaaagagtcttccatggaccgccccaccttccttgacaaggatggcggcctagtg
gaagagcccactacttcaccatttttgccttcaccaagcctgaagctccccctttcaaac
agtgcactccctaatcagaccctgggcgggattgcctcagggctgggcatgcaaaacttg
aattcttctagacagataccgagtggcaatctgggtatgtttggcaatagcggagcagca
caagccaggaccatgcaacagccgcagcaaccgccagtgcaacctcttaattcatcccag
cctagtcttcgtgctcaagtgcctcagtttctatcccctcaggttcaagcacagcttttg
cagtttgcagcaaaaaacattggtctcagccctgcacagttaacctcgccaattaataat
cctcagcatatgacgatgttgaaccagctctatcagctgcagctggcgtaccaacgttta
caaatccagcagcagatgttacaggctcagcgtaatgtttccggacccatgagacaacag
gagcagcaagttgcacgtacaatcaataacatgcagcagcagatccagcagcaccagcgc
cagctggcccaggccctgcttatgaagcagcagcctccccctccacatctatctttgcac
ccctctgcaggcaaatcagccatggatagcttttcaccccatccccaggcacccggccta
cctgacctgcagaccaaagagcaacagtcttcaccgaacacctttgctccttaccctctt
gctggactgaacccgaacatgaatgtaaacaacatggacattactggtggtttgtcagtg
aaggacacttctcagtcccagtctcgccttcctcagtggacacaccccaactcaatggat
aatctgtctagtgctgcttcttctcttgaccagaactccagcaagcacggtgctatacct
ggaggtttaagtattggtcctccaggcaagtcctccattgatgactcttacagccggtat
gatctgatgcagaacagtgaatctcctgccagtccgcctgtagctgttcctcacagctgg
tcacgtgccaaaactgatagtgataaaatttccaatggctccagcataaactggccacca
gagtttcatccaggagtgccctggaaaggactgcagaatattgatcctgaaaatgaccct
gatgtcactcctggaagtgttccaactgggcctaccataaacaccacgatacaggatgtt
aatcgctatcttctcaagagtggagggtcatccccaacatcatctcagaatgccacgctg
ccttcatcgagtgcctggccgcttagtgcctccggctacagtagctctttcagcagcatt
gcatctgcacctagcattgcaggtaaattgtcagacatcaagtctacatggtcctctggc
ccgatctctcacacacaagcctctctctcccatgaactctggaaggtacccagaaacact
actgctcctacgagaccacctccaggcttaacaaacaccaagccatcatccacatggggt
gccagtcccctgggttggaccagctcttactcctctggttctgcctggagtactgacagc
tcagggagaacgagcagctggctggttcttcgaaacctcacaccccagattgatggttcc
acgctgcggacgctgtgtttgcaacatggccctctaataacattccacttgaacctgacg
caagggaatgctgtggtccggtacagttccaaggaggaagcagccaaggcccagaagtct
ctgcatatgtgtgtcctgggaaacactaccatcctggccgagttcgccggggaggaggaa
gtcaaccgtttcctggcgcaggggcaggcgctgccgcccacctccagctggcagtcc
DBGET
integrated database retrieval system
