Merops nubicus (carmine bee-eater): 103768592
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Entry
103768592 CDS
T08417
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103768592 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnb03400
]
103768592 (MSH2)
DNA repair and recombination proteins [BR:
mnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103768592 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
103768592
NCBI-ProteinID:
XP_008933992
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
TQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSTKENDWYLAYKGSPGNLAQF
EEVLFANNDMSTAIGVVGVKLSTADGQRIVGVGYVDTTLRKLSVCEFPDNDQFSNLEALL
VQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEE
QMNSAALPEMEKQVAILSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALN
LFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPE
LRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVQALEKHEGAHQML
LLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMNELEEE
MQSILKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKYTIVDTQKNGVKF
TNSKLSSVNEEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHV
SNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITFEKGKQMFHIITGPN
MGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLE
TASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATHFHELTALA
DQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALEL
EEFQNIGKSKESEGEPPAKKVYREREEGEKIIQDFLCQVKALPLTDMSEEDIKIKLKQLR
NDVLAKNNGFVNEIISRTKVTS
NT seq
2591 nt
NT seq
+upstream
nt +downstream
nt
gaactcagaagctagaaagcgttgtgcttagtaaaatgaactttgaatcttttgtgagag
atctgcttctggttcgtcattacagagttgaagtttacaagaacaaagcagggagtaaat
caaccaaagaaaatgactggtatttagcatacaagggatctccaggaaatcttgcccagt
ttgaggaagttctctttgccaacaatgacatgtcaacagccattggggttgtgggggtta
agctgtctactgctgatgggcaaagaatagtaggagtggggtatgtcgacactacgctga
gaaaattgagtgtctgtgagtttccagataatgatcagttctcaaacctggaagctctac
tggttcagctaggaccaaaggagtgtgtgctaccaggaggagagactgctggagagatgg
gaaagctacgacaagtcattcaaaggggaggaatcctgattacagacaggaagaaggcag
atttcacaacaaaagatattgttcaggatctcaatcgtttgttaaaatcaaaaaaagaag
aacaaatgaatagtgcagcattgccagagatggaaaagcaggttgctattttgtccttgt
cggccattatcaagtttttagagttgctgtcagatgaatctaattttgggcaatttgaac
tgactacttttgatcttagtcaatatatggttctagataatgcagctgttcaagccctca
acctttttcagagttctgtggaaaatgctaacactgcacagtctctagctggtttactaa
ataaatgcagaactcctcaaggacagagactagttaatcagtggatcaaacaaccactta
tggacaagaatagaattgaagaaaggttgaatttggttgaagcttttgtggtggatccag
aactccgccagtgccttcaggaagatctcttgcgtcgctttccagatcttaatcggctgg
caaagaaatttcagagacaagcagcaaacttacaggactgttaccgaatgtatcaggcta
ttaatcaactgcctaatgttgtgcaagcattagaaaaacatgaaggagctcaccagatgt
tgttgttggcagtgtttataacacctcttaatgatatctactctgacttctcaaagtttc
tggagatgatagaaacaacattggacatggataaggtcgagaatcatgaatttcttgtca
aagcttcttttgatcctaatttgacagaattaagagagaagatgaatgaactggaagaag
aaatgcagtccattttgaagagtgcagccaaagaactaggtttggaagctggcaaaagta
tcaaactggagacaaattcacagtttggacatcactttcgaataacctgcaaggaggaaa
aagttctccgtaacaattcaaaatacacaatagttgatacacagaagaatggtgtgaagt
ttactaacagcaagctgagctccgtcaatgaggaatatataaagaacagagaagagtatg
aagaggctcaggatgcaattgttaaggaaatcattaacattgcttcaggctatgcagaac
caatacagacaatgaatgatgtgatagctcagttagatgcaattgtcagctttgcccacg
tgtccaatggagcaccagtgccatatgtccgtcctgtcattctggaaaaaggacaaggaa
ggattgtgctgaaaggtgcccggcatccttgcatcgaagtgcaagatgaggtggccttca
tccccaatgacattacatttgagaagggcaagcagatgttccacattattactggtccta
acatgggggggaaatcaacctacatccgacagacgggggtgattgttctcatggcccaaa
ttgggtgttttgtaccatgcgactctgcggaaataaccattgtggattgtatcctggctc
gggtgggagctggggacagccagctgaaaggtgtgtcaactttcatggctgaaatgttag
aaactgcttcaatccttaggacggcatccgaaaactccctgataataattgatgagctgg
gaagaggaacttctacttatgatggctttggtttagcatgggctatttcagaatacattg
ccagcaaaatctgtgctttctgtatgtttgctacacacttccatgaactgacagctcttg
ctgaccaagtgccaacagtaaataacctgcatgttactgctctgaccagcgacgacacgc
tgacgatgctttatcgtgtcaaggaaggtgtttgtgaccagagttttggaatacatgtag
cagagttggcggctttcccaaaacatgtgatagaaagtgcaagagagaaagcattggagc
tggaggagtttcaaaacattggcaagtccaaggaatctgaaggagaaccaccagccaaga
aagtctacagagaaagagaggaaggtgaaaagataattcaggattttctttgtcaagtga
aagcattgcccctgacagacatgtcagaagaagacatcaaaatcaagctgaaacagctga
gaaatgatgtgttggcaaagaacaacggttttgtgaatgaaatcatttcccgaacaaaag
ttacatcctga
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