Merops nubicus (carmine bee-eater): 103768800
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Entry
103768800 CDS
T08417
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103768800 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnb03019
]
103768800 (EDC4)
Messenger RNA biogenesis [BR:
mnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103768800 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
103768800 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
Rrn6_beta-prop
WDR55
NBCH_WD40
Beta-prop_EML_2
EIF3I
Motif
Other DBs
NCBI-GeneID:
103768800
NCBI-ProteinID:
XP_008934201
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
SVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSLAKPVHRSISLGALQEKQVICLSGDDSS
TCVVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYA
IRAASNGSAMVRVLSVSTAERTLLKGFTGSVADLAFAHLNSNQLACLDEAGNLFVWRLAM
DKEKIQEEILVNIKRPGNTPLNTSRRIIWCPFIPDDNEESGEEGSQTLALLHEDRAEVWD
LDIIRANNSSWPVEVPSIKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQIYI
EGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSW
TCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFS
SISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDSLGVEGAQGAGAVESAAGVLIKL
FCVHTKALQDVQIRFQPLHSPDMSASVPAHGSHEDFAFPDHMADLNTEGLGSEKGSVHGS
QPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSTSLQQITVSPGSSVSSLTAVTAM
SSTSVTDTSMPRPSEDLTVSPKMQLDTSLTLSSSSSSLQASPRSHSVLIPGLPDKLTPKA
PVPVAAGNPSLALELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETLQRSF
GAAPGGLPAEVLEPSHHADTMASAASALHLLSPRNRHGSEHSHHSLDMPPVEVDRLNAPS
LLETALTQENASSDSVVSQPWPAAPDITRETRNSMDSSQN
NT seq
2465 nt
NT seq
+upstream
nt +downstream
nt
gttcagtgaatgagaaccagagaccatcaaattcctataatggagacctgaatgggctgc
tggtgcctgatcccattgtggctggagatggaccatctctggctaagccagtgcatcgca
gcatttctctgggagccctgcaggagaagcaagtcatctgcctttctggtgatgacagct
ccacttgcgtagtgatatcggcaaaggatgtggagatagtggccagcagtgattccagca
tcaccagtaaggccagagggagtaacaaggtgaaaatacagcctgttgctagatatgact
gggagcagaaatattattatggcaatctgatagctgtttcaaactcttacctggcttatg
ccattagagctgccagcaacggctccgccatggtgcgggtgctgagcgtcagcactgccg
agcggaccttgctgaagggcttcacaggcagcgtggcagacctggcttttgctcatctca
actccaaccagttggcgtgtctggatgaggctgggaaccttttcgtctggcgcctggcca
tggataaagagaaaatccaagaggagatcttggttaacatcaagcgacctggcaacaccc
cgttgaacacctctcgaagaatcatctggtgccctttcatcccagatgataatgaggaga
gtggtgaagagggaagtcaaacgttggcattgctgcatgaggacagggcagaggtgtggg
atttggacattatccgagcgaacaacagctcctggccagtggaggtgcctagcatcaaag
aaggcttcatcgtagtgaaaggccacagcacgtgcctgagcgagggagccctttctccag
atggaactgtgttggccacagcaagccatgatggttttgtcaaattctggcaaatctata
ttgaggggcaagacgagccaagatgtcttcatgagtggaagccccatgatggcaggcctc
tgtcctgcctgctcttctgtgacaaccataaaaaacaagacccagaggttcccttctgga
gatttctcatcacaggagcagatcagaacagagaactgaagatgtggtgcactgtgtctt
ggacctgtctgcagactgtgcggttttctcctgacatcttcagctccatgagtattcttc
ccagcctgaaagtctgcctggacctctccgctgaatatctgatactgagcgatgtgcaga
gaaaagtcttgtatgtgatggagctgatgcagaaccaagaagagggcaaagcttacttca
gctccatctcggagttcctcctcacccacccagtcctgagctttggcatccaggcggtga
gccgctgtcggttacgacacaccgaggtgctcccagcagaagaggagaatgacagcctgg
gtgtcgaaggtgctcagggagctggggctgttgaatccgcagcgggtgtgctgataaaac
tcttctgtgtgcacaccaaggccctgcaggatgtgcagattagattccagcctctccata
gccctgacatgagtgcatctgtgcctgcccatggctctcatgaagactttgcctttccag
accacatggctgatctaaacacagaagggctgggctctgaaaaggggtcagtgcatggct
ctcaaccagacctgcggcgtatcgctgatctgccggtaccagcagacttcctgtctctct
ccaacgatgccaaacctaaactgatgactccagatgcattcatgacacccagtacatctc
ttcaacagatcactgtttctccaggcagcagtgtcagttccctgactgcagtcacagcga
tgagcagcacttctgtcacagatacttctatgcccaggccatcagaagacttgactgtga
gcccaaagatgcagctggacaccagcctcacactgagtagcagcagcagcagcctccagg
ctagtcctaggagccattccgttcttatccccggcctccctgacaagctaacaccaaagg
cacctgttccagtcgcagcaggaaacccctctctagcactggaactgcaggaggtggagc
ccttggtggtaccccaggcttctcccacccgtgagcgctcgccagacgtcatttcctctg
cttccacagccatgtcccaggatatcccagagattgcttctgagaccttgcagcgcagct
ttggggcggccccgggcgggctccccgcggaggtgctggagccctctcaccacgccgaca
cgatggcctccgccgcctccgccttgcacctgctgtcgccgaggaaccggcacggctccg
agcacagccaccactctttggacatgcctccagtggaggtggacagactgaacgctccgt
ccttactggagacggccttaactcaggaaaacgcgtcttctgacagcgtcgtgagtcagc
cctggccagcggcccctgacatcaccagggagaccaggaacagcatggattcctcacaga
attag
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