Merops nubicus (carmine bee-eater): 103769332
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Entry
103769332 CDS
T08417
Symbol
POLR1A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103769332 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnb03021
]
103769332 (POLR1A)
Enzymes [BR:
mnb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103769332 (POLR1A)
Transcription machinery [BR:
mnb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103769332 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
HMG_box
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
103769332
NCBI-ProteinID:
XP_008934765
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
KLSVKPITNAQYLDNVGNPAANGLYDLALGPPDSKEACATCMQNFSNCPGHFGHIELPLT
VYNPLFFDKLFLLIRGSCLNCHMLTCTRAVVHLLLSQLKVLEKGLLHAVHDLEVILNRFL
EQCADATGSEIEEELNRHVQEMLQSYQIRDQCSNVKNVCECRNKLIAQFWKAHMSSKKCP
NCKSRRSLVRKEHNSKLTVTYPSAVLSKTGGKDILDEPAAIDDSLLGKRGYLTPMTAKEY
IMALWKNEGFFLXSLFPGMDPQETSGFSPDMFFLDLLVVPPSRYRPVNRVGDRLFTNGQT
VNLQAVMKDARLIRKLLVFMAKEQCQPIKITEEGIQTETGENEPLDHSVLTTIPGQTIAD
KLYNAWIRLQSHVNIVFDSDMDKLTTEKYPGIRQLLEKKEGLFRKHMMGKRVDFAARSVI
CPDMYIGTSEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPKVHPGASMVINEDGSRT
VLSASSLTQREAIAKQLLTPSSGAPQSGLKIVCRHIKNGDVLLLNRPPLLNPQPTLHRPS
IQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLAFADEQYLV
PKLSKTDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRGLTDKKGRIKIFPPAIM
KPQPLWTGKQVVSTLLVNIIPENYAPLNLTGKAKIGGRAWVKGPANGCLNLDSMCESQVI
IRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGATSGKVLTCLGRLFTAYLQLYRGFTMG
IEDILVKPEADHKRKKIIEKSSQGGIEAVRAALNLPETATCEEIQGKWQDAHLCKDQRDF
NMVDLKFKEEVNNYNNEINKVCMPLGLHRSFPANNLQLMVQSGAKGSTVNTMQISCLLGQ
IELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPSEFFFHCMAGREGLVDT
AVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPEQFP
FIAANYEVIQKTNHLDEALARMESHQANLQFKAIKKWRTRHQNSVQREGGFLMFSRKKKA
SVKAQIPGGELKNGRDPATLQLLKMWYELDEKKRRKYLKKANRCPDPSLGVWRPDTYFAS
VSETFENGVEGYINKWESENRQSWMCPSLSSERLKDLLYLKWQRSLCDPGEAVGLLAAQS
IGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPTMSVPVFNTKKALKKV
KQLKKQLTRVCLAEVLQNVEIEESLQLECKQNNHRLYKIKFHFLPHEYYREEKCVKPRQI
LHFMETRFFKILLDAIKRKSAKMATFTEVSARKATQKDLDGDQDKALSSQEGPAEEEENI
VDAEPDEGDGDATAAKQRKNQEEEVDYESEEENEEENAENLEEEETELEKEEMSPGAEED
QDGVNGDESQHLSFLSQTQNEKDRLHQSAELRVNAVLESHPSIQDYTFDTENELWCEVSL
ALPLLKVYFDLSSLLVSLARSAVIHEVKGITRCLLNETTNQQGQKELVLHTEGINLAELF
RYSNILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVYGIVVDPRHLSLVADYMC
FEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVVGKVVKGG
TGLFDLKQPLT
NT seq
5077 nt
NT seq
+upstream
nt +downstream
nt
gaaactgagtgtcaagcccataacaaacgctcagtatctggataatgtggggaatccagc
tgccaatggactgtacgacctggctttgggccctccggactctaaagaagcatgtgcaac
ttgcatgcagaacttcagcaactgccctggtcattttggccacatagaactgcctctgac
tgtctacaaccctctgttttttgacaaattattccttctaattcgaggttcttgtttgaa
ttgtcacatgctgacatgcactcgagctgtggttcacttgctgctaagtcagctgaaggt
tctggagaaagggttgcttcatgctgtccacgatcttgaagtcattctgaacaggttctt
agagcaatgtgcagatgcaacaggctcagaaattgaagaagagttaaatcgccacgttca
ggagatgctacagagttatcagataagagatcagtgttcaaacgtcaaaaatgtgtgtga
atgtagaaataaactgatagcccagttctggaaagcacatatgagttcaaagaaatgccc
aaactgcaaatctaggaggtcactagtgaggaaggagcataacagcaagctgacagtgac
ctacccctctgcagtactctctaagacaggagggaaggacattctggatgaaccagcagc
cattgatgacagtcttttaggaaagagagggtacttgacaccgatgactgccaaggaata
catcatggctctgtggaagaacgaaggtttctttttgtgatctctcttccctgggatgga
tccccaagagacttctggattcagtccagacatgttttttttagatctgcttgtggttcc
tccttcaaggtatcgtcccgtgaatcgtgttggggaccggctcttcacgaacggccagac
tgtgaacctgcaggctgtcatgaaagatgccaggctgatacggaagctcttggttttcat
ggcaaaagaacagtgtcagcccataaaaattacagaagaaggaatccaaacagagacagg
agagaatgaacctctggatcattctgtcctgacaacgattccaggacagaccattgcaga
taaattgtacaacgcttggattcgcctgcagagccacgtcaacattgtatttgatagtga
catggacaagctaacgacagagaaataccctggaattcgtcagctcctggagaagaagga
agggctgttccggaagcacatgatggggaagcgcgtggacttcgccgctcgctcggtcat
ctgccccgacatgtacatcgggaccagcgagatcggcatccctatggtatttgctaccaa
actgacttatcctcagccagtcactccttggaatgtcaaagagctgaggcaggctgtcat
aaatggcccaaaggttcaccctggggcctccatggttattaatgaagatggatctcggac
ggtgttgagtgcaagcagcctgacccagagggaagccatagccaagcagctcctcactcc
ttcttcaggcgcaccccagtcaggactgaagattgtgtgtcggcacattaagaacgggga
cgtgctgttgctgaaccgcccgcccttgctgaacccccagcccaccctgcacagaccctc
catccaggctcaccgggcccgaatcctgcccggagagaaagtgctgaggcttcactacgc
caactgcaaggcctacaatgctgactttgatggggatgaaatgaacgcccacttcccaca
gagcgagctgggcagagcagaagcctacaccttggccttcgctgatgaacagtatctggt
cccaaagttaagtaaaactgatgggaagccacttcctggcttgatccaggaccacatgat
ttctggagtcagcatgacaatccgaggctgctttttcaccagagagcagtacatggagct
ggtttaccgagggctaacagacaagaaaggaagaattaaaatctttcctcctgccattat
gaaaccacagccattatggacaggaaagcaggttgtttctacattgttagtaaacatcat
tccagaaaactacgccccactgaacctgactgggaaagctaagattggtggaagagcctg
ggtaaagggacctgcaaacgggtgcctcaatctggattcaatgtgtgaatctcaggttat
tattagaaatggggaattgctgtgtggagtcttggacaaggctcactttggcagctctgc
ctatggcctggtccactgttgctatgagatctatgggggtgcaaccagtgggaaggtgct
gacatgtctgggacgcctctttactgcttacctgcagctctacaggggatttacaatggg
gattgaagatattttggttaaacctgaagcagaccacaaaaggaaaaaaattattgaaaa
gtcaagccagggaggtattgaagctgttagagctgctcttaatttgccagaaacagcaac
atgcgaagagatccaagggaaatggcaggatgcccatctctgcaaagaccagagggattt
taacatggttgatctgaaattcaaggaggaagtaaacaattacaacaatgaaattaacaa
ggtttgtatgccccttggtctccacaggagctttccagcaaacaatttacagctgatggt
acagtcaggagccaaaggatccactgtaaatacaatgcagatttcttgtttgctgggcca
gattgagttggaaggtcgaagacccccgctgatggcatctggcaaatctttgccatgttt
ccagccttatgatttttcccctagttcaggaggatttgtgactggcagatttctcactgg
aatcaaaccttctgaattcttctttcactgcatggctggcagggaaggtcttgtagatac
agctgtcaaaaccagccgctctgggtacctacaaaggtgtatcataaaacatctggaagg
gctggtggtgcagtatgacctgacggtacgagatagcgacggcagcgtggtgcagtttct
ctatggagaagatgggcttgatatccctaaaactcagttcctacaacccgagcagtttcc
tttcattgcagcaaactatgaggtaatccagaagacaaaccacctggatgaagctttagc
aaggatggagtctcaccaagctaacctgcagttcaaagccatcaaaaagtggcgaaccag
gcaccaaaactctgtgcagagagaaggaggttttctgatgttttccagaaagaaaaaggc
gagtgtaaaagcacaaatcccaggaggagagctcaaaaatggaagagatcctgctacctt
acagttattgaaaatgtggtatgaactagatgagaagaaacgaagaaagtatctgaagaa
ggcaaataggtgtcctgatccaagccttggtgtttggcgtccagatacttactttgcatc
tgtctcagaaacatttgaaaatggagttgaaggttatatcaacaagtgggaatctgagaa
cagacaaagttggatgtgtccatcactttcttctgagaggttaaaggatttgttgtattt
gaagtggcagcgatctctttgtgacccaggagaagctgtgggtcttcttgcagctcagag
tattggggagccttccacacagatgactctgaacaccttccactttgctggcagaggtga
aatgaatgtcaccttgggtattccaaggttgcgggagatattgatggtggccagtgcaaa
cattaaaacaccaaccatgagtgtgcctgtgttcaataccaagaaagctctcaagaaggt
gaaacagcttaagaagcagctcacaagagtgtgcttagctgaggtcttgcagaacgttga
gatagaggaatccctgcagctggagtgcaagcagaacaatcatcgcctctacaaaatcaa
attccatttcttgccccacgagtattaccgagaggagaagtgtgtgaagcccaggcagat
cttgcacttcatggaaacaaggttctttaaaattcttctggatgcaattaaaaggaagag
cgcaaagatggcaactttcactgaagtcagtgctcggaaggcaactcagaaagatttaga
tggtgaccaagacaaggcactgagcagtcaggaggggccagcagaggaagaagagaacat
tgttgatgcagaacctgatgaaggggatggtgatgctacagcagcaaaacagaggaagaa
ccaggaagaagaggttgattatgagagtgaagaagagaatgaggaagaaaacgctgagaa
cctagaagaagaagagactgaattggaaaaagaagaaatgtctcctggtgctgaagaaga
tcaggatggagtaaatggtgatgaatctcagcatctctcctttctgtctcagactcaaaa
cgagaaagatcgattgcatcagtcagcagagctgagagtaaatgctgttctggagagcca
cccttcaatacaggattacacatttgacactgaaaatgaactttggtgtgaggtttcgct
ggcgctgcccttgctgaaggtgtacttcgacctctcctccctgctggtgtcgctggcgcg
cagcgccgtcattcacgaggtgaaggggatcacacggtgcctcctcaacgaaaccaccaa
ccagcaggggcagaaggaactcgtgctgcatactgaggggatcaaccttgccgagctctt
cagatactccaatattttggacctaaacagactttattccaatgatattcatgccatggc
taagaattatggaattgagtctgccctgagggtgattataaaggaaataaaagatgtatt
tgctgtatatgggattgtggtagaccctcggcacctttcacttgtggcagattacatgtg
ttttgaaggattttataaaccactgaatcgttttggaattcagtccaactcctcccctct
gcaacagatgacatttgaaaccagctacaaattcttgaaggaagcaaccatgatgggtgc
ccacgacgaactgcgctccccttctgcatgcctcgtggtgggaaaggttgtgaaaggggg
cactggtttgtttgacctcaagcaaccccttacatag
DBGET
integrated database retrieval system
