KEGG   Merops nubicus (carmine bee-eater): 103769475
Entry
103769475         CDS       T08417                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
mnb  Merops nubicus (carmine bee-eater)
Pathway
mnb03030  DNA replication
mnb03410  Base excision repair
mnb03420  Nucleotide excision repair
mnb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mnb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103769475 (RFC5)
   03410 Base excision repair
    103769475 (RFC5)
   03420 Nucleotide excision repair
    103769475 (RFC5)
   03430 Mismatch repair
    103769475 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mnb03032]
    103769475 (RFC5)
   03036 Chromosome and associated proteins [BR:mnb03036]
    103769475 (RFC5)
   03400 DNA repair and recombination proteins [BR:mnb03400]
    103769475 (RFC5)
DNA replication proteins [BR:mnb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103769475 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103769475 (RFC5)
Chromosome and associated proteins [BR:mnb03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103769475 (RFC5)
DNA repair and recombination proteins [BR:mnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103769475 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103769475 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA AAA_lid_RFC1 AAA_assoc_2 DNAX_ATPase_lid DEAD Hydantoinase_B Gp44_lid Thioredoxin_6 MIB_M2
Other DBs
NCBI-GeneID: 103769475
NCBI-ProteinID: XP_008934921
LinkDB
Position
Unknown
AA seq 255 aa
MVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVIEKF
TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHIIQEEGVDVTEDGMKAL
VTLSSGDMRRALNILQSTTMAFGKVTEENVYTCTGHPLKSDIANILDWMLNLDFSTAYRK
ITELKTLKGLALQDILTEIHLFVHRVDFPPSIRIQLLIKMADIEYRLAAGTSEKIQLSSL
IAAFQVTRDLIVAEA
NT seq 768 nt   +upstreamnt  +downstreamnt
atggtgctggagctcaacgcctccgatgaccggggtatcgacatcgtccgagggcccatc
ctgagcttcgccagcaccaggaccatctttaagaaaggcttcaagctcgtcatcctggac
gaagccgacgccatgacccaggacgctcagaacgccctgagacgagtgatcgagaagttc
acggaaaacacccggttttgcctcatctgcaactacctctccaagatcatccctgccctg
cagtcccgctgcacccgcttccgcttcggcccactcaccccggagctgatggtgccccgg
ctgcagcacatcatacaggaggagggggtggacgtgacggaggatgggatgaaggctctg
gtgaccctctcgagcggggacatgcgcagagccctcaacatcttgcagagcaccaccatg
gcctttgggaaggtgacggaggagaacgtctacacctgcacgggacacccactgaagtcg
gacatcgccaacatccttgactggatgctgaacctggacttctccaccgcctaccgcaaa
atcacggagctgaagacgctgaagggcttggccctgcaggacatcctcaccgagatccac
ctcttcgtgcacagagtcgatttcccaccctccatccgcatccagctgctgatcaaaatg
gcagatatcgagtaccggctggctgctgggaccagtgagaagatacagctgagctccctc
attgctgcgttccaagtcaccagggatctgatcgtggccgaagcctga

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