Merops nubicus (carmine bee-eater): 103770072
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Entry
103770072 CDS
T08417
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mnb04040
]
103770072 (TRPA1)
Ion channels [BR:
mnb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103770072 (TRPA1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
DUF5685
Motif
Other DBs
NCBI-GeneID:
103770072
NCBI-ProteinID:
XP_008935569
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MEAAVQAWLWSCPRDFSELIQGSPARAARGGDRLGAALAVGDEGTGCCVPTSGPGRAGDG
QARGAWVAGGFRDSESEVQRSRKLNVLKYLNGLPHKVISDGSACRLRSFIKKNRSGLTKV
DELNATPLHHAAEGGQIELMQLIIDDSSSEVLNVMDSSGNTPLHWATKKNQVESVSLLLS
KGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPIIVACYKDNPE
ALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCMEILLKKGEELGHSAKTHINFTNNGK
CSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSYAGEE
SIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASWKIVN
LLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCTPLHY
ACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLLNEGD
KKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILDTNVK
CTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDVVSAV
ILHKRWEEAVVTFSHYSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFYIEYN
FRYLQCPLTLNKKLKEGEDIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAYGFRA
HLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTEIYEARPLEYENSYFTRVCMCLVLIMSLL
GICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAVYLSW
MNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYSTPLL
SVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGLAVGD
IAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVFQYCF
GCEDSTTDAQSTDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAEDEDSN
DLFQHKFRKRQLEHKNSKWDTVLKAVKTNVPNPSTEKNSSFF
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagctgtgcaggcgtggctctggtcatgtcccagagacttctcagagctcatc
caggggagccctgcaagagccgcgagaggtggggacaggctgggagccgccctggccgtg
ggggatgaaggcacagggtgctgtgtgcccacgtctggaccagggcgagcaggagacggg
caagcgagaggggcatgggtggccggtggctttcgtgactcggagagtgaggtccagagg
tcccggaagctaaacgtgcttaagtatctgaatgggctgccccataaggtgatttcagat
ggaagtgcctgtaggctacggagcttcattaagaagaatcgttctgggcttaccaaagtg
gatgagttaaatgccaccccactgcatcatgctgcagaaggaggtcagatagagttaatg
cagctgatcatagatgattcttccagtgaagtattaaatgtgatggattcttctgggaat
acccccctgcactgggccacgaagaaaaaccaggttgaaagtgttagtttgcttctcagc
aaaggagccaatccaaacattctcaactccaatatgatggcacctttgcatatggctgtg
cagtccctgcataatgaaattgttaagattttagtccagcatagcagtacagatgttaat
ttggaaggtgaagcagggaacacacctataattgtggcgtgttacaaggataatcctgaa
gcactgacactcctgattgaaaatggagggaagatctgcaagccgaacaaaacggggtgt
atgcccatccatgcagctgcattctcaggtgcaaaaacctgcatggagattcttttgaaa
aaaggggaagaattgggtcactctgctaaaacccacatcaattttaccaacaatggaaag
tgcagtcctcttcatttggcagtgcagagtggggacctcgaaatgattaaaatgtgcatt
gaatttggagcccaaatagatctaaaacagaatgaaaaatgcacagcacttcattttgct
gccactcaaggagcaactgagattgtaaagttaatgatgtcatcctatgctggtgaggaa
tccattattgatgctgtagatgggaataaggaaacccttcttcacaggacagcattgttt
gatcattatgaactggcagagtatttgatttcaatgggagctaatattgacagtgttgac
atagaaggtcgatcccctcttctgctggccacctcctgtgcatcgtggaaaattgtgaat
ttactgctctcaaaaggagcaaatgtatcattaaaagatcatcttggtcggaatttcttg
cacttaacggtgttgcagcccggaggattacagcatctgaatgagaaatatctgcagatg
gaacacattaaaaaccttgtggtggatgaagataacgaaggatgtactccgttgcattac
gcatgcagacaaggtgtggccctttctgtaaataatttactcagcctcaatgtttccatc
tactctaagagcagggacaagaagtccccgttacactttgctgccagctatggccgcatc
aatacgtgtcaacgacttataagagatatgaaggacacgagactgttgaatgagggtgat
aagaagggaatgactccccttcatttggcagcccagaatggtcatgagaaggtagtacag
tttcttctgaagagaggggccctttttctctgtgattataaaggctggacagccctgcac
cacgcggccttcggagggtacactcgcacaatgcagatcattctggacaccaatgtgaag
tgtactgacagagtggatgaagaagggaacacagctttgcacctagctgcaagagaagga
catgcaaaagcagtaaggttgcttctcgactacggggcgaaaattctgttcaacaaggca
gtagcttcttttttccatgaagcaatacacaataggagaaaagatgtggtgtctgctgtc
attttgcacaaaagatgggaagaagctgttgtgacattctctcactattctagtgccaat
aagtgtcctttgctggaaatggttgagtatcttcctgattcatttaaactggttttggac
aactgcataattgagtcatcagaggagaagacaagtcgagacttctacattgaatataac
ttcaggtatcttcagtgtcccttgacacttaacaagaaactaaaagaaggtgaagatatt
ttctatgaaccacttaccactttaaatgccatggtacgacacaatcgcatggagctcctc
agtcatcccgtgtgtaaagagtatttgcttatgaaatggatggcctatgggtttcgagca
catctaatgaatttaggcatatactctcttggtctcatcccactgactcttctggtcact
cacatacagccaggaagacctttgaatggcacagagatctatgaagcaagaccattagaa
tatgagaactcatacttcacaagggtgtgtatgtgtttagttttaattatgagtttactg
ggaatctgcaaagaaatatttcaactgattcagcagaaattgaaatatttgttggactac
tccaatctactggactggacaatttatactacaagcataatttttgtgtcatctttattt
attaatacaccagcccatttgcagtgggaatgtggagcaattgctgtgtacttgtcttgg
atgaacttcctgctttaccttcaacggtttgaaaactatggcatctatgttgtgatgttc
tgggaaattctgaggactttgattcgcattgctgtcgtgttctttttcctgatattggcc
tttggactcagtttctttgtccttttgggctcacagcaaacatacagcacacctttgctt
tctgtaatgaagacatttgcaatgatgctgggagacattaattaccatgatgcatttctt
gatccattactaagcagtgaattgccatatccattcctgagttacacagttctcattata
tttactttgcttattccaatccttcttatgaacttgctaattggtttggctgttggggac
atagctgaagtacaaaaatatgctgcactcaaaaggattgccatgcaggttaatcttcac
accaacttagagaagaagctgccattctggttcctgagtcgggtggaccaggaatcaatc
actgtgtatcccaacagaccaagatactgtggattcatgagtgtgttccagtattgcttt
gggtgtgaggactctaccacagatgcacagagcactgatacaacattagagctggaagtt
ctgaagcagaaatataggctcaaagatatatcaacactgttggaaaagcaacatgacctg
attaaactgattatccagaaaatggagatagtgtcagaggctgaggatgaagacagcaat
gatttatttcagcacaagtttaggaaaaggcagttagagcacaaaaacagtaaatgggat
acagtgttaaaagctgttaaaacaaatgtgcctaacccaagcacagaaaagaacagcagc
ttcttctag
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