KEGG   Merops nubicus (carmine bee-eater): 103771034
Entry
103771034         CDS       T08417                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
mnb  Merops nubicus (carmine bee-eater)
Pathway
mnb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mnb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103771034 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnb03019]
    103771034 (WDR33)
Messenger RNA biogenesis [BR:mnb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     103771034 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Collagen Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 103771034
NCBI-ProteinID: XP_008936566
LinkDB
Position
Unknown
AA seq 1320 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKT
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGPLHGPQLFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPLHQGAAGPQGFMGPQGPQ
GPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLGPQGP
PGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLNPRG
MQGPPGPRDNQGPNPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTMLGPPQ
ELRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLGDGP
RPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDSRGPPNHHMGPLSDRRHD
QNSGGPDHGPERGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHPDKRF
GHRLREFEGRGGPPMQEEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDDRYP
RDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEEFGPDDTFDSPDENSRGRDHG
ARGRGRGALRGGRKGLLPTPDELPRFEGGRKPESWDGNRDPGPRPDHPPHDGHSPANRER
SSSLQGMDMASLPPRKRPWHDGPGASDHRDMDAPGGPPEERSKGRGNSGPSQRAPKSGRS
SSLDGDHHDGFHRDEAFGGGPGGGNNSSRGGRSGSNWGRGNNMNSGQSRRGASRGGGRGR
NT seq 3963 nt   +upstreamnt  +downstreamnt
atggccacagaaattggctccccgccccgattcttccacatgccgaggtttcagcaccag
gcccctcggcagctcttctacaagagacctgactttgcccagcagcaggcaatgcagcag
ctcactttcgatgggaagcggatgaggaaagctgtgaacagaaagaccatcgactacaac
ccctctgtaattaagtatttggagaacagagtatggcagagagaccagcgagatatgcga
gcaatccagcctgatgcaggatattataatgatttggtccctcccataggaatgttgaac
aaccccatgaatgctgtaacaacaaaatttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggagagtttactttgtggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacatggagcagatgtgaaatgtgttgactggcaccccaccaagggattagttgtg
tcaggaagtaaagacagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacgctccacgctcataaaaacacagtgatggaggtgaaactgaacctgaatggc
aactggctgctcacagcttctcgtgatcatctctgcaagctctttgacatccgtaatctg
aaagaagaactgcaggtcttcaggggtcacaagaaggaagccacagctgtggcctggcat
cctgttcatgaagggctgtttgccagtggaggatctgatggctctttgttgttctggcat
gttggggttgagaaggaggttggtgggatggaaatggcccatgaaggaatgatctggagt
ctggcatggcatccccttggacacattctctgttcaggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgcgagatcgctacaacctgaacctgctg
cctgggatgtcagaggatggtgtggaatatgctccaggagatgatctggaacccaacagc
ctggcagttatccctgggatgggaatacctgaacaactgaaaatagccatggagcaggag
cagatggggaaagatgagtccaatgatattgaaatgacaatcccaggactggattgggga
atggaggaagtaatgcaaaaggaccaaaagaaggtgccacagaaaaaagtgccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcagaataaagttcctttgcctccc
ccacctgagccactgaatgatagaaaggaagatataaagctggaggagaaaaagaagaca
caggcagagattgaacaggaaatggcagcacttcagtacacaaacccacagctcttggag
caattgaagatcgagcgacttgcccaaaagcaagctgagcaagtgcagccaccccctcca
ggaggccctcttcacggaccccagcttttcccagggcaaggcccaatgtcacagatgcct
caaggatttcagcagccccttccacctcagcagatgccaatgaatatgcctcaaatggga
cctcctggtccacaaggacagttcagacctccgggaccccaaggacaaatgggacctcaa
ggtccgttacaccaaggagctgctggcccacaagggttcatgggaccacagggcccccaa
gggcctccacaaggaatgccacggcctcaggatttacatggacatcaaggaatgcagaga
catcctggccctcatggaccaatggggcctccaggtccacagggtaatgctggcccgcaa
ggccacttaggaccacagggtctacctgggtctcagactcatttaggacctcagggtcca
cctggcccacaaggtcacttaggtcctcaaggtcctcctggtggtcaaggaatgcaaggg
ccacccggtccccgaggaatgcaaggacctcttcctcatggcatgcaaggagctccagga
tctcaagggatgcagggccctatatctcaagggcctttgatgggacttaatccaagaggg
atgcagggtccaccaggacctagagataaccaaggacctaatccccaagggatgatgatg
ggtcatccgcaagaaatgagaggtcctcatatgcaaagtggtttactaggacacggtcct
caggagatgaggggcctccagggacctcctcctcaaggtacaatgctaggaccgccgcaa
gaattgcgtgggccaccgggtccacaggggcagcagggacctccacagggctctttagtg
gggcctcaaggaaacatgcaaggacctcagggacagcccaatccgtcgcgggggccgcac
ccctcccagggccctctgcctttccagcagcagaagacacctctgttgggtgatgggcct
cgtcccccctttaatcaggatggacagaacccaggtcctcccccactgataccaggactg
gggcagcagggaggacaaggtcgtcttggccctcacaaccaaggacctggtcttaataaa
ggtgactcccgtggtccaccaaaccatcacatgggccctctctcagatagaaggcacgac
cagaacagtggtggtcccgatcatgggcccgagagagggttgtttcgaggtggccaggag
tggggtgatggtagagacagcaggggcatgccagatagacgaggacctcacccagatttc
catgatgactttgatcgaccagatgacttccgtgacgacttccatccagataagagattt
ggccaccgcttgcgtgaatttgaggggagaggaggcccgccgatgcaagaggagaagtgg
agacgaggtggacctgggcctccctttcctcctgatcacagggaatttgaaggagggggt
tccaaccgtgggcctcctggtgcttgggaaggacggagaccttcggatgatagatatccg
cgggaccccgaggacgcgcggttccgagggagacgagatgaaagcttcagaagaggaggc
ccctcgagacacgagggccggggacccaggggcagagatggctttcctggccctgaagag
tttgggccagatgacacttttgactctccagatgaaaactcaagaggaagggaccatggt
gctcgggggcgaggtcgcggtgctcttagaggaggccggaaaggtttgcttcctactcca
gatgaactgccacgctttgagggagggaggaaaccagaatcctgggatggaaacagagat
ccaggtcctcgtccagatcacccccctcatgatgggcactctccagccaacagggaacgc
tcctcctcactccagggcatggacatggcctcgctgccaccacggaaacggccctggcac
gatgggccgggggcctctgaccacagagacatggatgctccaggtgggcctccagaggag
aggagcaaaggacgaggaaattcaggaccctcacagagagcaccaaaatctgggcggtct
agctctttagatggagaccaccacgatggattccacagggatgaagcctttggtggaggc
cctggaggaggcaataactcttcccgaggaggaaggagtggaagtaattggggaagagga
aataacatgaactctggtcagtcaagaagaggagcatctaggggcggtggaagaggccga
tag

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