Merops nubicus (carmine bee-eater): 103771072
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Entry
103771072 CDS
T08417
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103771072 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnb03041
]
103771072 (PRPF4)
Spliceosome [BR:
mnb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103771072 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
103771072
NCBI-ProteinID:
XP_008936606
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MTMSTPGQGGVDKATKSKPAEEGDAPAAKRAPIFYGSLEEKERERLAKGESGLLGKEGMK
AAIEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGE
PITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSREEYQQTWYHEGPRSLKTA
RVWLANYSLPRAVKRLEEARLFKEIPEATRTSQRQELHKSLRSLNNFCSQIGDDRPLSYC
HFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAIVFHPKATVSLDKKDVNLA
SCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEE
ILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSP
NGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKVW
THPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgtcaacgcccgggcaggggggtgtggacaaggccaccaagagcaaacctgct
gaggagggggatgcccctgcagccaagagagcccccatcttctatggcagcctggaggag
aaggagagggaacgtctggcaaaaggggagtcggggctgctggggaaggaagggatgaaa
gctgcaattgaggctggaaacatcaacatcagcagtggcgaggtgtttgacctggaggac
cacatgagcgagcggcaggcggaggtgctggccgagttcgagcgcaggaagcgcgcccgg
cagatcaacgtctccacggacgactcggaggtgaaggcctgtctgcgggccctcggggag
cccatcaccctctttggagagggccctgctgagaggagggagaggctgaggaacatcctg
tcggtggttggcacggacgccttgaaaaagaccaggaaggatgatgacaggtcaaaaaaa
tccagggaagagtatcagcaaacctggtaccacgaaggaccacgcagcctgaaaacagca
agggtgtggctggccaactactccctgcccagggcagtgaagcgcctggaagaggctcgg
ctcttcaaagagattccagaggcaaccaggacctcacagaggcaggagctacacaaatcc
ctgagatccttgaataacttctgcagccagattggagacgatcgcccgctctcctactgc
cacttcagccccaactccaagctcctggctacagcctgctggagtggattgtgcaagctc
tggtctgtgcctgactgcaaccttgttcacaccttacgaggacacaacaccaacgtagga
gccatcgtcttccaccccaaggccacggtctctctggacaagaaggatgttaacctggcc
tcctgtgctgctgatggctcagtcaagctctggagcctggaaagtgatgaacccgtggca
gatattgaaggacacagcatgagagtggcacgtgtgatgtggcacccctctgggaggttc
ctgggcaccacctgctacgatcactcgtggcgcctgtgggacctggaggctcaggaggag
attctgcaccaggaggggcacagcaaaggggtctacgacatcgccttccacaccgacggc
tccctcgccggcacaggtgggctggacgctttcggccgggtgtgggacctgcgcacggga
cgctgcatcatgtttctggaaggccacctgaaggagatctatgggcttaacttctcccca
aacgggtaccacgtggcgacgggcagcggcgacaacacgtgcaaggtgtgggacctgcgc
cagaggaagtgcatctacaccatccctgcccaccagaacctggtcaccggggtcaagttc
gaacccaaccacggcaacttcctgctcaccggcgcctacgacaacactgccaaggtctgg
acccaccccgggtggtcccctctgaagaccctggctggccacgaggggaaggtgatggga
ctggacatctccctcgacggccagctgatcgccacctgctcctacgacaggaccttcaag
ctgtggacagcagagtag
DBGET
integrated database retrieval system
