Merops nubicus (carmine bee-eater): 103771087
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Entry
103771087 CDS
T08417
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnb03000
]
103771087 (RC3H1)
04121 Ubiquitin system [BR:
mnb04121
]
103771087 (RC3H1)
Transcription factors [BR:
mnb03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103771087 (RC3H1)
Ubiquitin system [BR:
mnb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103771087 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
103771087
NCBI-ProteinID:
XP_008936621
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPSRKTSALPNGIVSTGSTVTQLISRGTDSGYEAALKPGKMDHLSSSAPGSPPDLM
ESVPKSSIAALPVNPHPVPARAPTDLPSVSVTKQLQMVPRGSQLYNAQQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPAPPYLDHYPPYLQDRVVSPQYTQPQQY
PPMGQPIYPQHYDSRRIYPPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEG
YCPVAPHLSQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE
EYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVDSKAMR
DQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQGANTKSI
ISDYSPYGTHGGWGGSPYSHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRMEL
QQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWTGMISSEQLSLELHQ
VEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLEPQNKVPADDLALTFSSEVPNGS
ALTQENIGLLSNKTASLSLSEDPEGGGDSHDSQRAGVPPTSAP
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacacagact
ttcgacgaaacaatccggaagcccatcagcttgggctgcggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaacacagac
attgaactccttcctgtgaactcagctttgctgcagctagtgggtgctcaggttcctgag
cagcagccaattactttatgtagtggagctgaagacaccaagcattacgaggagggcaag
aaatgtgtggaagaattagcattgtacctgaaaccactcagcagcgcgagaggtgtgggt
cttaacagtactactcagagcgtgctaagtcgtcccatgcaaaggaaacttgtgacatta
gttcattgtcagctagtggaggaagaagggcgcatcagagccatgcgtgcagcacggtcg
cttggtgaaagaacagtcacagagctcattcttcagcatcagaaccctcagcagctctct
tccaacctctgggctgcagtgagagccagggggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctactggctctggaagatggatctgctttgtcacgaaag
gtcttggttctatttgtggttcagaggctggagccacgatttcctcaggcttctaaaact
agcattgggcatgttgtccagcttctttacagagcctcatgcttcaaggtaacaaagcgt
gacgaggattcctccctgatgcaactgaaggaggaatttcggacttacgaagctctgaga
agggaacacgattcccagatagttcaaatagccatggaagcaggtttgcgcatcgcaccg
gatcagtggtcctcactgctgtatggagaccagtctcacaaatcccatatgcagtctatc
attgacaagttgcagaccccagcctcgtttgcacagagtgttcaggaattaactattgct
ctccagaggactggagatccagctaacctgaatcgtcttcggcctcacctagagctcctg
gcaaatattgatcccagtccagatgctccacctccgacctgggaacaactggaaaatgga
ctagttgctgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaag
aaaggaacagatcagcaacagcctcctcagcacagcaagtacaagacatacatgtgccga
gacatgaagcagagaggaggatgcccccgaggggccagctgcacctttgcacactcacag
gaggagctcgaaaaattccgtaaaatgaacaagcgactggttcccaggagacccctgagt
gcctccctgggccagctaaatgaggtgggcctgccttcaggagctatcctctcggaggaa
gggggagtggacttgcccagtaggaaaacctctgctctgccaaatggaattgtgtcaaca
ggcagcacagtgacacaacttatttctcgagggactgactccggttatgaagcggctctg
aagccagggaagatggaccatctgagcagcagtgcccctggatccccacctgacttgatg
gaatctgtcccaaagagttctattgctgccttaccagtgaaccctcatcctgtgcctgct
cgggcaccaacagatctgccttcagtgtctgtcaccaagcagttgcaaatggtaccacga
ggctctcagttgtataatgctcagcaagcagatatgttttatcaagatcctaggggagct
gctccgccatttgagccagcaccctaccaacagggagtttactatcccactcagtccatg
tctcgctttgtccgacctcctccatcggctcctgagcctgctccaccttatttagaccat
taccccccctacctgcaggatcgtgtggtgagcccacagtacacacagccacagcagtac
cctcctatgggccagcccatataccctcagcactacgacagccgccgcatctacccccct
gtccagccctatcagcgagaggagattgtccgaggaagccctgtgcccattgaaattcca
caagcagctgtaccttcctatgtacctgaatccagagacagataccagcaaacagagggt
tattgcccagtggctccacatctcagtcagatcagaccttcgtgccacaggcctcatccc
agcctggacgaacttcaccgacgaaggaaagagatcatggcccagctagaagagaggaag
gtgatttctccacctccttttgcaccatcgccaaccttacctcatccttttcattcagag
gagtacttggatgaagacctaaaggtagctgggaaatacaaaggaaatgactacagccag
tactctccctggtcctgtgacaccatcggctcctacattggaaccaaagatgcaaaaccc
aaagacgttgtggcagcgaggagcgtggagatggcgaacgtagatagcaaagccatgcgt
gaccagcggttggacatgcagcgacgagcagcagagactggtgatgatgacctcattcca
tttggagaccgaccaactgtgtcgagatttggggctatctctcgtacttccaaagcgatg
taccagaattctggtcccatgcaggccatggcggttcagggagctaacaccaaatcaatc
atttcagactacagtccttacggaactcacggtggctggggaggctctccatattctcat
caaaatataccttctcagggacgtttcaatgacagggagaggctgtccatgtcagacgtg
gctggtcatgggaaacagttgccctcagctgagcgagagcagcagctgcgcatggagctg
cagcaagtagaccatcagatcagccagcagacacaaatgcggggactggaggctgttagt
aacaggctgctgttgcagagggaggcgactaccctggcaggccaaccacagcccccaccc
ccacctcccaagtggactgggatgatctcaagtgaacagctgagcttggagctacaccag
gtggaaagggaaattgggaagagaacccgtgagctgagcatggagagccagtcttcactg
gatataaaaaacaaactgggcaccactaaacagacagaaaatggacaattggaaccgcaa
aacaaggttccagctgatgacctcgccctgacattcagcagcgaagttccaaatggatca
gccttgacacaagagaatattggcctcctgtcaaacaagacagcatctctcagcctgtca
gaggacccagagggaggaggagacagccacgactcccagcgagcaggagttccacccacg
tctgctccatga
DBGET
integrated database retrieval system
