Merops nubicus (carmine bee-eater): 103771312
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Entry
103771312 CDS
T08417
Symbol
CIITA
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103771312 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mnb01001
]
103771312 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mnb04054
]
103771312 (CIITA)
Enzymes [BR:
mnb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103771312 (CIITA)
Protein kinases [BR:
mnb01001
]
Serine/threonine kinases: Other
TAF1 family
103771312 (CIITA)
Pattern recognition receptors [BR:
mnb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103771312 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
Motif
Other DBs
NCBI-GeneID:
103771312
NCBI-ProteinID:
XP_008936850
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
VVRLQQPILLTGLKIDSKRQIMNSTSVSDNGYLDLLHSDIDPLHLYTLLDPKLSGNEEGD
FSAEPEIDASYYDQFSNMDFLGTMENGENGDELYLCSNTVEAYARIAELAEYVLKDQQEK
QVEDTFGENLILDEISAENTEKLTDTKMQKCHKRTFLGSAESCFGASEPKYKKIVEVPAV
SAGSGSLLAVPLNSHPASSTSLTNQHMSICVPATNALERSFVIPGSSAPLIPECLPVDVK
GIQENTGFADAPQQILNFVLRNGTSDVIIYQVLTSTETLKSPSLPVSLCGLETFKEVQAP
IIPSEEPFKRPKPVEAFSTSLKDYFRDMCKSVAMEREVTLDHLFIDGTLVQSQTETKTGK
NNMKAMEKGLVTCSLQGKEKAVLKRNQIFQIPGGKALETKVIVVLGKAXLVQKICQDWSN
GEISQFEFVFSFDYKQISLPEKQYSLKDLLLEFFVKPQEGSQEIYEYILQNPGKVLLVFD
GFDGLRDHENFPRCSASQPEKDSCSVKELLSGLIQKKILSGCTLLLTARPKDKVYQYLSK
VDKTIEIVGFSPQQRELYVTKYFEGLPYCGNALKLIKECEYLFSHCYSPAMCRFVCFVCE
TVLEMGDKSLPSTLTTLFLKFVQQKVTATPTAVTAVQNEESLAVLAHIAWCLGEKHQSTM
KSDLPSKEVKEFALKHGFFLPFAFPSRSDSEEEEYGSTFSDFVIQNFLSALHLMLAEEIK
DKSLMKYLSFPSKKKKPYNWLDLMPRFLAGLFFLQNDPYFCSLSNKDDKQTTKKQKTLLK
YIRRLQINELCPERLLELLHCIYETQSNYLLQHVALKLKPDLSFLGLVLTPPDVHVLCSI
LKRSRKEFFLDLRNSSVDTQGLRDLLGLKSVASFRASLDDIVRLWKSLEQTKDCQLLRAS
TEKFVLDPFKAKTMKDISDLSDLVEMQKMNCVQDASGCSIYEIPAIKNLRKLELALGPVH
GLQGFLKLVEILPAFPSLKNLE
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaggctgcagcagcctattctcctcactggactcaaaatagacagcaagagacaa
atcatgaactcaacatcagtgtctgacaatggctatcttgatttgctgcacagtgatatt
gatccattgcatttgtataccctccttgatcctaagttatctggaaatgaagaaggtgac
ttctctgcagaacctgaaatcgatgccagctactatgatcagttcagtaatatggatttc
ctgggcactatggaaaacggtgaaaatggggatgaattgtatctctgctccaacaccgta
gaagcttatgctagaattgctgaattagcagaatatgtactcaaagatcaacaggagaag
caggtggaagacacttttggagagaaccttattttggatgaaatctctgctgaaaacact
gagaaactgactgacacaaagatgcagaaatgtcacaaacgaaccttcttaggctctgca
gagagttgttttggtgcttcggaacccaaatacaagaaaattgtggaagtccctgcagtg
tctgcaggcagtggcagtctcttagctgtgcctctcaacagccatccagctagctccacc
tcactgactaaccagcacatgtccatttgtgttcctgctaccaatgcactggaaagaagc
tttgtaattcctggatcttcagcacctttgattccagagtgtctacctgttgatgtgaaa
gggatccaagagaatacaggctttgcagatgctcctcagcagatacttaattttgttctt
agaaatggcacatctgatgttataatatatcaagtgctgacttctacagaaacattgaaa
tccccaagtttaccagttagtttatgtggtctagaaacgttcaaagaagtccaagctccc
ataattccttctgaagaacctttcaagagaccaaagccagtggaagctttcagcacatca
cttaaggattatttccgagacatgtgcaagtctgtggccatggagcgtgaagtaaccctt
gatcacctttttattgatgggacacttgttcaaagccaaactgaaaccaagactgggaag
aataacatgaaagcgatggaaaaggggctggtaacttgcagtttgcaagggaaggaaaag
gcagtccttaaaagaaaccaaatatttcaaatccctggaggtaaagccttagagactaaa
gtgatcgtggtgctgggaaaagcanntcttgttcagaagatctgccaggactggtccaat
ggagagatttctcagtttgaatttgtattttcatttgactacaaacaaataagcttgcct
gagaagcaatacagcctgaaggatctgctgcttgagttctttgtaaaacctcaagaggga
agccaagagatctatgagtatatattgcaaaatcctggtaaagtccttctggtttttgat
ggttttgacgggttacgtgatcatgagaactttcctcgttgctcagccagccagcctgaa
aaagactcgtgcagtgtaaaggagctgctttcaggactcatccaaaaaaagatactcagt
ggttgtactttattacttacagcaagaccaaaagacaaggtgtaccagtatttgtccaaa
gtggataagactattgagatagttggattttcccctcagcagagagaactgtacgtaacc
aagtactttgaaggattaccctactgtggtaatgcactgaaattaatcaaagagtgtgag
tacttgttcagtcattgttacagccctgctatgtgtagatttgtttgttttgtctgtgag
acggtacttgaaatgggggacaaaagccttccttcaactcttactacactcttcctgaaa
tttgttcagcaaaaggtaacagctacgccaacagccgttacagccgtgcaaaatgaagag
agtctggctgtgctggcccatattgcctggtgtcttggagaaaagcaccaaagcaccatg
aaaagtgatcttccttctaaggaagttaaagagtttgctctgaaacatggatttttcctg
ccatttgcattccccagccgttcagatagtgaagaagaggagtatggaagcacattctct
gattttgtcattcagaatttcttgagtgcgcttcaccttatgttagcagaagagatcaag
gacaaaagtctaatgaagtacctctcttttccatccaagaagaaaaaaccttataactgg
ttagatttaatgcctcgatttttggctggattgtttttcctccaaaatgacccttatttc
tgctccctttcaaataaggatgacaaacaaacaaccaagaagcagaaaacactcttgaaa
tacattagaaggctgcagataaatgagctctgtccagagaggttgcttgagcttttacat
tgtatttatgaaacacaaagcaattatcttttgcagcatgtggccctgaagctcaagcca
gacctgtcttttctgggcttagttctcacaccacctgatgtccatgtactctgctctatt
ttaaagcggtcaagaaaagagtttttcttggatttgcgaaacagcagcgtcgacacacaa
gggctcagagacttgttgggcctcaagagtgtggcatcattcagggcctccctcgatgat
atagtcaggctctggaaatctttagaacagacaaaagactgccaactgctgagagcatca
acagagaaatttgttcttgatcccttcaaggcaaagacaatgaaggacatcagtgacctt
tcagaccttgtagagatgcagaagatgaactgtgtgcaagatgcatctggctgcagcatc
tatgagatccctgccatcaaaaacctccgaaaactagaactggcgctgggtccagtacat
ggccttcagggattcctaaaacttgtggaaattcttccagcatttccatcacttaagaat
ttagagtga
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