Merops nubicus (carmine bee-eater): 103773174
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Entry
103773174 CDS
T08417
Name
(RefSeq) structure-specific endonuclease subunit SLX4-like
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103773174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnb04121
]
103773174
03400 DNA repair and recombination proteins [BR:
mnb03400
]
103773174
Ubiquitin system [BR:
mnb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
103773174
DNA repair and recombination proteins [BR:
mnb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103773174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
Motif
Other DBs
NCBI-GeneID:
103773174
NCBI-ProteinID:
XP_008938781
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
GALLRFLYGAHTHVPAGLRPQLGALAARFGVKELMAICENNTGESQVSSGVDSEDDLISV
RDDKECEDRAENFQDLLKSVWVGEDEEEVAMLSPECQKEDDNGVGEQELEEIYEFAATQR
KMVQGEPEVSEETDCSICSDTETAHSPEQQTEGEELKRSESASISNSFKDLRDDNDVERS
KCNSSAHEEKVQNINRCESMNDPQTAFVPHHSEPQNWDVAPHGATAKEGEPVRCEDVKAS
KSSQVSQDEVDHCGKHSPSFHGDTNTNESYECLFPATQGGCCEPCLVGEAPAEKHVDVDE
PLLSSRSQTDLSPRRNGFYGSPPPKPYVPLSPAVGFSPASPKSQRKFARKHMSIPKQKKK
ENSVPSDEIQVQKANEMDTAPGNEDAISPAELPHTELNKHTNAPLLPSLAIRAQDATAQG
NKEGDVIVLSSDDEMELQQDRESPESGSAPEEGEIPQQLECTSREQDPEISNPEHNPSVT
ETEQRSAQVSCGVTGTVHVRNDLKVSTQLPLSRQTEAWMESRQSPNLSTDKRLSHEMSSG
TDCSWLVQDTPLLSRSRSSSTQTRVTSINSVKSPGSERSTKNLAAGSRNHEMSGNLIKIH
ETTLPDKHLPVENGVSERSPSRNNSPPISPVDPVLLSPGHTNIKSQCANISFLSKPDPLC
HEQSLEDKPDSSVVEVEDSEKETSLASVSSSVVLCEEPQLPLDGCWHTEYLSPARGNSRG
DTSTASTPRPGSWHEHWESPVHAQGIMGSTPLRGGPGGRRTSLLCLEKSPIEACASVGSR
PSYLNSKIWDDWNGEEEDVFPEVLPMAERLTAAAGACRADPVKTPEPSCQESDEAPSTPM
TPMPHYSMMETPQLKKELRRFGVRALPKRQMVLKLKEIFQYTHQDVDSDFEDEIPSSQPP
PKRSPAKSSRQSKAGDTASTSRAAGRRKKVATAPAVLPVGRAESDLAGSCEAGSAAPKEG
IKTTYHPEGAKEQKQSSELAERWSLAADDEEPVLPASQQSAGSSSDGSDISFDSESSFMK
GFEACAFESEEEEEEEELPASQAAAREEDKLEAVRCYIRSNTALYHRVLFYEPIELADLH
TELKQNGIKISKAKLLDFLDAHCITCTTARARKEREQKRKGKKNQRRRY
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
ggggcgctgctgcggttcctgtacggcgcccacacccacgtccctgcagggctgcgcccc
cagctcggggctctggccgccaggtttggtgtgaaggaactgatggcaatatgtgaaaac
aacacgggagaaagtcaggtgtcttctggagtggattcagaagatgatcttatctctgtg
agggatgacaaagaatgtgaggacagggctgagaacttccaggacctcttgaagtcagtg
tgggtgggtgaagatgaggaagaagtagctatgctgagccctgaatgccagaaggaagat
gacaatggggtgggtgaacaggagctggaggaaatctatgagtttgctgcgactcagaga
aagatggttcaaggtgagccagaggtgagtgaggaaacagattgcagcatctgcagtgac
actgagacagcccacagtccagagcagcaaactgagggagaagagttaaagagatctgaa
tctgcttcaataagcaacagcttcaaagatttgagggatgacaatgatgtggaaagatct
aaatgtaattcctctgcacatgaagagaaagtgcagaatataaataggtgtgagagcatg
aatgatccacagactgcttttgtgcctcaccacagtgaacctcaaaactgggacgtagca
ccccatggtgccactgctaaggaaggagagcctgttagatgtgaagatgtgaaggcttcc
aagtcatctcaggtctcacaggatgaggtagatcactgtggaaaacactctccaagcttc
cacggagatactaatacaaatgaaagttatgaatgcttgtttcctgcaactcagggaggt
tgctgtgagccttgcctggtgggagaagcacctgctgaaaagcatgttgatgttgatgag
ccacttctatccagcaggtcacaaacagacctctctccacgcaggaatggtttttatggg
agtcctcctcccaaaccttacgtgcccctttctcctgctgttggcttctcacctgcatct
ccaaaatcacagagaaagtttgccaggaaacacatgtcaataccaaagcaaaagaaaaag
gaaaactcagtcccttctgatgaaatacaagtccagaaagccaacgagatggatactgca
ccaggaaatgaggatgcaatttctccagcagagcttccccacactgagttaaacaagcac
acaaatgccccactgttgccatcgctggccatcagagctcaggatgctacagctcagggg
aacaaggagggtgatgtcattgttttatcttctgatgatgaaatggagttgcagcaagac
agggagtccccagagtcaggctctgctccggaggaaggggagatccctcagcaactggaa
tgtacaagcagggaacaagatcctgagatatcaaaccctgaacataacccctcagtcact
gaaacagagcagaggtcagcccaggtctcctgtggcgttacaggtacagtgcatgtaagg
aatgatttaaaggtgtccacccagttgcctctcagcagacaaacagaggcttggatggag
agcagacagagtccaaacctgagcactgataaacggctcagtcacgaaatgtcctcaggt
acagactgctcctggctggtccaagacaccccacttctgagcagaagcagaagttcctca
acacagactcgggtcacaagtattaattctgtaaagagtccaggatctgaacgcagtaca
aagaacttagcagcaggtagcaggaaccatgaaatgtctggaaacttgataaaaattcat
gaaacaacattgccagacaaacatttgcctgtggagaacggagtcagtgagaggagccct
tccagaaacaactccccacccatttctccagtggatccagttctcctctcccctggccac
accaacataaaaagccaatgtgccaatatctcctttttatccaaacctgaccctctgtgc
cacgagcagtctctggaagataaaccagatagcagcgtggtcgaggtggaggacagtgag
aaggagacaagcttggcctcggtgagcagcagcgtggtgctctgcgaggagccccagctc
cccctggatggctgctggcacactgagtacctgtccccagccagaggtaacagccgtgga
gacaccagcactgccagcacccccaggcctggctcttggcacgagcactgggagagccca
gtccacgcccaggggatcatgggcagcaccccgctccgagggggtcctggtggcagaaga
acatctctgctctgtcttgagaagagtcctatcgaggcgtgtgcgtcagtgggcagtaga
ccgagttacctgaactccaaaatctgggatgactggaatggagaagaggaagatgtattt
ccagaggtacttcctatggctgagaggttgacagctgcagcaggtgcctgtcgggcagat
cctgtaaagactcctgaaccttcctgccaggagagcgacgaggctcccagcactccaatg
acaccaatgccacattactccatgatggagacaccacagctgaagaaggagttgaggagg
tttggagttcgtgctctcccaaagcgccagatggtgttgaagctgaaggagatattccag
tacactcaccaggacgtggactcggacttcgaggatgaaatcccatcgtcccagcctccc
cccaagaggtccccagccaaaagctccaggcagtcaaaggcaggagacactgccagcacc
tccagggctgcaggcaggaggaagaaggttgctactgctcctgcagtgctccctgtgggg
agggcagagagcgaccttgctggatcctgtgaagcaggctctgcagcacccaaggaggga
attaaaacaacatatcacccagaaggagccaaagagcagaaacagtcatctgaacttgca
gagagatggtctctggcagctgatgatgaggagccagtgctcccagcatctcagcagtct
gcaggctcttcatcagacggaagcgacatttcttttgattcagagagttctttcatgaaa
ggatttgaagcctgtgcttttgaatccgaggaggaggaggaggaagaggagcttccagcc
tctcaggcagcagctcgggaagaagataagctggaggcagtaaggtgctacatccgttca
aacactgccctgtaccacagggttctcttctatgagccaattgagctggctgacctgcac
actgagctgaaacagaacggcattaaaatctccaaggcaaagctgctggactttttagat
gctcactgcatcacatgtaccacggccagagcccggaaagagagggaacagaaaagaaag
ggaaagaaaaaccagaggaggcgatactga
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