KEGG   Merops nubicus (carmine bee-eater): 103773373
Entry
103773373         CDS       T08417                                 
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog
  KO
K26109  nuclear exosome regulator NRDE2
Organism
mnb  Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:mnb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnb03019]
    103773373 (NRDE2)
Messenger RNA biogenesis [BR:mnb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     103773373 (NRDE2)
SSDB
Motif
Pfam: NRDE-2 TPR_14 HAT_PRP39_N HAT_Syf1_CNRKL1_N Suf
Other DBs
NCBI-GeneID: 103773373
NCBI-ProteinID: XP_008938986
LinkDB
Position
Unknown
AA seq 1109 aa
RTTSRSELSEESDADGSQKQSSTRRKKKTKKHHYYKKTKKKTRGDSSSSGSDLDTKRVRD
KAAGSGRSHAKEAAAKLEKKTSNLTSNRFVWLDDVQVFTTETFRIDKKPDPANWAYKSLY
REDIARYKRRGESCLGLDPRKQCITWESSAPKRKELQKRSKRYFSKNNVKMLNMDGIPVC
NKSSPSDPTAFIPVFEMETDDPSGTTEVNPLGIYDPSTTVWLEGKGSKSADHEPENTQQT
IQEPGINISSILMTKVEEHNKKVRENPRDINAWMEFVSFQDELMRGPSPYASMGEQEVRR
KSLRLILEKKLAILERAIESNPSNVDLKLARLKLCTEFWEPPALIKEWQKLIFLHPNNPE
LWKKYLLFCQSQFTTFSISKINSLYGKCLTTLAAVQDGSMVSHPLLPGTEEAMLAVFIQQ
CHFLRQAGHSEKAVSLFQALIDFTFFKPDSVKDLPTRGQVEFFEPFWDSGEPRVGEKGAR
GWKAWMHQQEKGGWIALKPDDDDDEEEVDEDQEIKDKTLPKWQIWLDIEYSREARHWLPW
RPDKTKKEPEEDCEDPERQVLFDDLGPSLIRLSNPDLQHQLVYSFLQFLGVPCTSKLFPS
NLYIAMDENNIFDNVLSDEKPLTTVDFPLSGFSSIGHMDTMLRRRHHIGHYKEGEEFIQN
VFHVLFPLFSGKEKVTLSICWLQYEIFKVVQCLQAKKKKKLKAQGRKSKKLAKSLLKAPD
NRNHLSLWKLYAYLEWLLGNIDDARKVFDTALCTAGTGGLKSPQLCSLGLLYAQLEVELL
ESTEGAVMSRAVHILTKLAESGPYVPYSGQVLSVNVLKARKTYEHALQDYLSKTPVSDQD
QVSDAKQLVNLVGCYALFQYLTVGIDAAVLIYAQTSEKLEASGPQKGENTGEDFGIQNFP
TALEAVTLLHTNLLRFHMKICVYPLNPLREALTEALKRYPSNQSLWRSYIHIQRKFHSAS
KARRFFDSVTRSTNSLEPWLFAIQAEQMRKKLIENVQRADFGEIHSTFPESGLANRIVAL
FEHAVQSENGTHCPLLWRMYLNFLASLGRKEKSKGLFYKALQNCPWAKVLYLDAVELFPE
HLQETLDLMTEKELRVRVPMEELDLLLEV
NT seq 3330 nt   +upstreamnt  +downstreamnt
aggaccacttcaagatcagagttgtcagaggaaagtgatgcagatgggagtcagaaacag
tcaagtacgagaaggaaaaagaaaacgaaaaagcatcactactataagaagacaaaaaag
aaaaccagaggggactccagtagcagtggatcagatctggacacaaagcgtgtcagggac
aaagccgcaggaagtggcagaagtcatgcaaaggaagcagcagcaaaactagagaagaaa
acatcaaatctcaccagcaatcgctttgtttggcttgatgacgtccaggttttcacaaca
gaaacattcagaatagacaagaaaccagaccctgcaaactgggcctacaaatccctgtat
cgagaagacatagcaagatataaaaggagaggagaatcgtgtcttggcctagatccaaga
aaacagtgtataacctgggagagttctgcaccaaaaaggaaggagttacagaagcgatcc
aaacgctacttctcaaagaacaatgtgaagatgctgaacatggatgggattcctgtttgc
aacaaaagttctccatctgacccaactgcttttatacccgttttcgaaatggaaactgat
gatccttctggcacaacggaggtgaatcctcttgggatttatgatccatcaactacagtg
tggctagaaggaaaagggagcaagagtgcagatcatgaacctgaaaatacacagcaaaca
attcaagagcctggaataaatattagctccattctaatgacaaaagtggaagaacataac
aagaaagtcagagaaaacccaagagatataaatgcttggatggaatttgtttcttttcag
gacgaattaatgagaggacctagcccttatgccagtatgggagagcaagaagtaagaaga
aaatcactgaggctgatcttggaaaagaagctggctattttagagagggcaattgagagc
aatccaagtaatgttgatctgaaactcgccaggttgaagctttgcacagaattctgggaa
ccaccagctttgatcaaagaatggcagaagctaattttcttacatcccaataatccagag
ctgtggaagaaatacctcctgttctgtcaaagtcagttcactaccttttctatttcaaaa
atcaatagtctctatggaaaatgtttgactaccttggcagccgtccaggatggaagcatg
gtatcacatcctctactgcctggcacagaggaagctatgctagctgtatttattcagcag
tgccactttctgagacaggctggccattctgagaaagcagtgtctttgtttcaggctctg
attgacttcaccttcttcaaacctgacagtgtaaaagatctgccaacaaggggacaggtg
gaattctttgaacccttctgggatagtggagaaccacgagttggagaaaaaggagcacga
ggctggaaagcatggatgcaccaacaagaaaagggtggctggattgctcttaagcctgat
gatgatgatgatgaagaagaggtagatgaggatcaagaaataaaggataaaactctcccc
aagtggcaaatttggttggatattgaatattctcgtgaagcaaggcattggttaccttgg
aggccagacaaaactaaaaaagaacctgaagaagattgtgaagatccagaaagacaggta
ttatttgatgatcttggaccatctttaatacggctttcaaatccagatcttcaacatcaa
ctagtgtactcatttttgcaattcctgggagttccatgtacaagtaaactctttccttcc
aacctctatatagccatggatgaaaataacatctttgacaatgtgctttctgatgaaaag
cccctgactactgtcgattttccactttctggattcagcagtattggtcatatggatacg
atgctacgaaggagacatcacataggacactataaagaaggagaagagttcatacagaac
gtttttcatgtgctgttcccactgttttcaggaaaggaaaaagttaccctctccatttgt
tggttacagtatgaaatatttaaggtagttcagtgtctccaagcaaaaaaaaagaagaag
ctgaaagcacaagggaggaagagtaaaaagctggccaagagtcttcttaaagcacctgac
aaccgaaaccacctttctctctggaaactgtatgcctacctagaatggctgctcggtaac
attgatgatgccaggaaggtatttgacacagctctttgcacagcagggacaggaggactg
aagagtccccagctctgcagccttggtctgctttatgctcagctggaagtggaactacta
gaaagtacagaaggagctgttatgtcacgtgctgttcatatattgaccaaattggctgaa
agtggaccatacgtcccctatagtggacaagtgttatctgtgaatgtcttgaaagctcgt
aaaacatatgagcatgcacttcaagattatttaagtaaaacaccagtttctgatcaggat
caggtcagtgatgctaaacagctggttaacttggttggttgttatgcactgttccagtat
ttgactgttgggattgatgctgcagtattaatatatgcacagacttcagaaaaacttgaa
gcttctggtccacagaaaggtgaaaatactggagaggactttggcattcaaaattttccc
actgctcttgaagctgtcacactgctgcatacaaatttactcagattccacatgaaaatc
tgtgtttatcctttgaatcctctgcgagaagcactaacagaggctctgaaacggtatcct
agcaaccagtctctttggaggtcatatatccacatccaaaggaagtttcacagtgctagc
aaagcacgaagattttttgatagtgtcacgaggtctactaactctttagagccgtggctg
tttgcaatccaagcggagcagatgagaaaaaaactcattgagaatgtccagagggcagat
tttggtgaaatacactctacttttcctgaatctgggttagcaaatcggatcgtagctcta
tttgaacacgcagtccagagtgaaaatggtacccattgtccactgctgtggagaatgtat
ttgaactttctggcttcactaggaagaaaagaaaaaagtaaaggattgttttataaagct
cttcaaaactgtccttgggcaaaggtgctgtacctggatgcagtggagctcttccccgag
cacctgcaggagacgctggacctaatgaccgaaaaagaactgagagtgcgggtacctatg
gaggagctggatctactgttagaggtttaa

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