Merops nubicus (carmine bee-eater): 103774939
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Entry
103774939 CDS
T08417
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-like
KO
K06252
tenascin
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb04510
Focal adhesion
mnb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103774939
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103774939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mnb00536
]
103774939
Glycosaminoglycan binding proteins [BR:
mnb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103774939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF
Fn3_Dep-1_2nd
hEGF
NDNF
Fn3_Dep-1_1st
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
103774939
NCBI-ProteinID:
XP_008940625
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
TGEDCGEPLCPANCHDRGRCVDNECVCDEGYTGEDCGELICPNDCFDRGRCVNGTCFCEE
GFTGEDCGELTCPNDCNGHGRCENGLCVCHEGFVGDDCSEKRCPHDCHNRGRCINGQCVC
HEGYVGEDCGELRCPHDWHXPXXXXXXXXXRGWGGRRCPNACHNRGRCVNGQCVCHEGFI
GDDCGELRCPNDCKNHGLCVNGQCVCDEGYTGEDCGELRCPEDCHNRGRCVEGRCECDNG
FTGEDCGELACPNDCHRRGRCVDGRCVCDEGFMGEDCRERSCPNDCNNAGRCVDGRCLCE
DGYLGPDCSDVSPPTELTVTNVTDKTVNLEWKHENLVNEYLITYVPTSSGGLDMQFTVPG
NQTAATIHELEPGVEYFIRVFAILKNKKSIPVSARVATYLPAPEGLKFKSVRETSVQVEW
DPLSFSFDGWELVFRNLKKDDNGDITSSLKRPETSYMQPGLAPGQQYNVSLHIVKNNTRG
PGLSKVITTKLDAPSQIEAKDVTDTTALITWSKPLADIEGIELTYGPKDIPGDRTTIDLS
EDENQYSIGNLRPHTEYEVTLISRRGDMESDPIKEVFVTDLDAPRNLKRVSQTDNSITLE
WKNSHADIDNYRIKFAPISGGDHAEITVPKGNQATTRATLTGLRPGTEYGIGVTAVRQDR
ESAPATINAGTDLDNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYISPSGKKNEVEIP
VDSTSFLLRGLDAGTEYTMSLVAEKGRHKSKPTTVKGSTEEEPELGKLSVSETGWDGFQL
TWTAADGAYENFIIQVQESNNPDETWNITVPGGLRFVNVTGLKANTPYNLTLYGVIQGYR
TKPLSVETMTGEHPEVGELTVSDITPESFNLSWTSTNGDFDVFTIEIIDSNRLLEPMEFN
VSGNSRTAHISGLSPSTDFIVYLHGISHGFRTQAISAAATTVAEPLLSKLIVSNATSDSV
SLAWEAQDNAFDHFILEVRNSDLPLDSLVHTVPGASRRYVVTNLKAATNYTVQLHGVIDG
QGGQTLTALATTEAEAQLGTLTLTNVTPDSFNLSWTTRDGPFAKFVIHVRDSHAAHDPQE
LTVSGGARSAHITGLLDYTAYDINIKGTTSAGVHTEPLTAFVVTGTRFK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
accggcgaggactgcggagagcccctctgccccgccaactgccacgaccgcgggcgctgc
gtggacaacgagtgcgtctgcgacgagggctacaccggcgaggactgcggcgagctcatc
tgccccaacgactgcttcgaccgcgggcgctgcgtcaacgggacctgcttctgcgaggag
ggcttcaccggggaggactgtggcgagctgacctgccccaacgactgcaacggtcacggg
cgctgcgagaacgggctctgcgtctgccacgagggctttgtgggggatgactgcagcgag
aagaggtgcccccacgactgccacaaccgcgggcgctgcatcaacgggcagtgcgtgtgc
catgagggatatgtgggcgaggactgcggcgagctgcggtgcccccacgactggcacnca
ccnnnnnnnnnnnnnnnnnnnnnnnnnnnncggggctggggggggcggcggtgccccaac
gcctgccacaaccgcgggcgctgcgttaatgggcagtgtgtgtgccacgaggggttcatc
ggggacgactgcggagagctgcggtgccccaacgactgtaagaaccacgggctctgcgtc
aacgggcagtgcgtgtgtgacgagggctacacaggggaggactgtggcgagctgcggtgc
cccgaagattgccacaaccgcgggcgctgcgtggagggacgctgtgagtgtgacaacggc
ttcacaggggaggactgtggcgagctggcctgccccaacgactgccaccggcgcgggcgc
tgcgtcgatggacgctgcgtgtgcgacgagggcttcatgggggaggactgccgtgagagg
tcctgccccaacgactgcaacaacgcggggcgctgcgtcgacgggcggtgcctctgcgag
gatggctacctggggcctgactgctccgatgtatctcctccaacagagctgactgtgaca
aatgtaacagataaaaccgtaaacctggaatggaagcatgagaaccttgtcaatgagtac
ctcatcacctacgtcccgaccagcagtgggggcttagatatgcagttcaccgtgccaggc
aaccagacagctgccaccatccatgaactggagccaggggtagaatactttatccgtgtc
tttgcaatccttaaaaacaagaagagtattccagtcagcgccagggtagccacatatctg
cctgctccagaaggtctgaaattcaaatctgttagagaaacctctgtccaggtggagtgg
gatcctctgagcttttcattcgatggctgggagctggtcttccgtaacctgaaaaaggat
gacaatggagatataaccagcagcttgaaaaggccagagacatcttatatgcagccaggt
ttggcgccagggcaacagtataatgtatcccttcatatagtgaaaaacaataccagagga
ccaggactatccaaagtgatcaccacaaagctcgatgccccaagccagatcgaggcaaaa
gatgtcacagacaccacagcccttatcacatggtccaaacccttggctgacattgagggc
atagagctcacttatggccccaaggatattccaggagacaggacaaccattgacctctct
gaagatgaaaaccaatattctattggaaacctgagaccacacacagaatatgaagtgaca
ctcatctctcgtcgaggggacatggaaagcgaccccataaaagaagtctttgtcacagac
ttggatgctccaaggaacctgaagcgggtgtcacagacagacaacagcattactctggag
tggaagaacagccacgcagatattgataattatcggattaagtttgctcccatctctggt
ggagaccacgctgagatcacggtgccaaagggcaaccaagcaacaaccagagctacactc
acaggtttgaggcctggaactgaatacggcattggagtgacagcagtaagacaggacagg
gaaagtgctcctgctaccattaacgctggcactgatcttgacaaccccaaggacttggaa
gtcagtgaccccactgaaaccaccttgtcccttcgctggagaagaccagtggccaagttt
gatcgttatcgcctgacttacattagcccctctggaaagaagaacgaagtggagatccct
gtggacagcacctcttttctcctgcgaggcctggatgcggggacagagtacaccatgagt
ctggtggcagagaaaggcagacacaaaagcaaacccacaactgtcaagggttcgactgag
gaggaacctgagcttggaaaattatctgtatcagagactggctgggatggtttccagctc
acctggacagcagctgacggggcctatgagaactttatcattcaggtgcaggagtccaac
aaccccgacgagacctggaacatcacagtcccgggcgggctgcgctttgtcaatgtcaca
ggcctcaaggccaacacaccttacaacctcacactttatggggtgattcaaggctacagg
accaaacccctttctgttgaaaccatgacaggagagcacccagaagttggtgagctaacc
gtttccgacattactcctgaaagcttcaacctttcctggacatccaccaatggggacttc
gacgtctttactattgaaattattgattctaacaggttgctggagcccatggagttcaac
gtctcaggcaattcaagaactgctcatatctcagggctttcccccagcactgattttatt
gtctacctccatgggatctctcatggtttccgcacacaggcaataagtgcggcagctaca
acagtagcagagcctctccttagcaaactcattgtatcaaacgctacctcagacagcgtg
tcactcgcgtgggaagcacaggacaatgcctttgaccattttattctagaagtcagaaac
tctgacttgcctttggactccctggtgcacacagtgccaggggcctcccggcgctatgtg
gtcaccaacctcaaagctgccactaattacactgtccaactccatggtgtaattgatggg
caaggtggtcagaccttgacagcactggcaaccacagaggctgaggcgcagctgggcacg
ctcacactcacaaacgttacccccgacagcttcaacctctcgtggaccaccagagatggg
ccttttgccaagttcgttatacacgttagagattcccatgcagcacacgacccccaggag
ctcacggtgtcgggaggtgctcgcagcgcccacatcacaggcttgctagattacactgcc
tatgacattaacattaaggggaccaccagtgcaggtgttcacacagagcccctcactgct
tttgtcgtgacaggtacccgcttcaag
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