Merops nubicus (carmine bee-eater): 103775024
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Entry
103775024 CDS
T08417
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnb03041
]
103775024 (DDX1)
03016 Transfer RNA biogenesis [BR:
mnb03016
]
103775024 (DDX1)
Enzymes [BR:
mnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103775024 (DDX1)
Spliceosome [BR:
mnb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103775024 (DDX1)
Transfer RNA biogenesis [BR:
mnb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103775024 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
SPRY
DEAD
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
103775024
NCBI-ProteinID:
XP_008940716
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
LNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATRGVTKGKYYYEVSCHDQGLCRV
GWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDIDKGQIKFSK
NGKDLGLAFEIPPHIRNQALFAACVLKNAELKFNFGEEDFKFPPKDGYIGLCKAPDGSVV
KSQHSGNAQVVQTQNLPNAPKALIVEPSRELAEQTLNNVKQFKKYVENPKLRELLIIGGV
AARDQLSILEQGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQGYSDFINRI
HGQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVP
VNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMD
QAIIFCRTKLDCDNLEQYFIQQGGGPDRKGHQFSCVCLHGDRKPQERKQNLERFKRGDVR
FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKEKEKVW
YHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHLNCTITQVEPDIKVPVDDFDGK
VTYGQKRALG
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
tgctcaataaatggcaaatgaacccatatgatagaggatcagcttttgcaattgggtcgg
atggtttgtgttgccaaagcagagaggtaaaagaatggcatgggtgcagagcaaccagag
gcgtgactaaaggcaaatactactatgaagtttcctgtcatgaccaaggcttgtgcagag
ttggttggtcaactatgcaggcttcactagacttgggcactgataaatttggctttggct
ttggtggcactggtaagaaatctcacaacaagcaatttgacagctatggtgaggaattca
ctatgcatgatacaattgggtgttatctagacatagataaaggacaaataaaattttcta
aaaatgggaaggaccttggccttgcatttgaaatcccaccacacataaggaaccaagcac
tttttgcagcttgtgtactgaagaatgctgaactgaaattcaattttggtgaagaagatt
tcaagtttccaccaaaagatggctacattggtctttgcaaggctcctgacggcagtgttg
taaaatcacaacactcaggaaatgcacaagtggttcaaacacagaaccttccaaatgctc
caaaagcattgattgtagagccatcaagagagctggcagaacaaactttgaacaatgtga
agcagttcaaaaaatatgttgaaaatccaaaattaagggaactgttgattattggtggag
ttgctgcaagagatcaactatctatactggaacaaggagtggatattgtcgtcggaactc
ctggaagactggatgacctggtctcaacagggaagcttaatttgtctcaagttagattcc
tggttctggatgaagctgatggccttctcctccaaggttattcagatttcataaacagaa
tccatggtcaaattcctcagataacttcagatgggaagagacttcaggtgattgtgtgct
ctgcaacactacattcttttgatgtgaaaaaactgtctgaaaagatcatgcattttccca
cctgggttgatttgaaaggagaagactctgtccctgaaactgtacaccatgtagtggtcc
ctgtaaatccaaaagctgacaaactctgggaaaggctcggcaagaatcatatcagaactg
atgaagtacacgccaaagataatacacgacctggcgctaacactccagaaatgtggtctg
aagctattaaaattctaaaaggagaatacactgttcgggcaatcaaagaacacaagatgg
accaagccattatcttctgcaggactaagctagattgtgataacttggagcagtacttca
tccagcagggcggaggccctgataggaagggacatcagttctcctgtgtctgtctgcatg
gtgacagaaagcctcaagaaagaaagcaaaacctggaaagatttaagagaggagacgtcc
gattcttgatctgcacagatgttgctgctagaggaattgatattcatggtgttccatatg
ttatcaacgtcacactccctgatgaaaaacagaactatgttcatcgcattgggagagtgg
gcagagctgagaggatgggtttggccatctcccttgtggcaaaagagaaagaaaaggttt
ggtatcatgtatgcagtagtcgtggtaaaggatgttacaatactagactgaaggaagaag
gaggttgtaccatatggtacaatgagatgcagttgctgggggagattgaagaacacttaa
actgcactataacccaagttgaaccagacataaaagtaccagtagatgattttgatggga
aagttacatatgggcagaaaagagctctgggtg
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