Merops nubicus (carmine bee-eater): 103775433
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Entry
103775433 CDS
T08417
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103775433 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnb03041
]
103775433 (DHX8)
Enzymes [BR:
mnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103775433 (DHX8)
Spliceosome [BR:
mnb03041
]
Complex C
Other components
Step II factors
103775433 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
PhoH
TsaE
AAA_16
ABC_tran
Cas3-like_C_2
Sigma54_activ_2
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
103775433
NCBI-ProteinID:
XP_008941134
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MRPPPKPSTSKETVVKPKSEKEKLKELFPALCRPDNPNIRNMLDEDDVKVAADALKELEA
LMPSADRQGKQRSSDHRAKRKRRSRSRSRDRKRRHRSRSRSRSRTWDKSRGKSRYRSRSR
SQSPSRDHKDRDKYIERSNERWRDKHIDRPPPEEPSIGDIYNGKVTSIMQFGCFVQLEGL
RKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLN
PNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDSLERKRLTRISDPEKWEIKQMIA
ANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKN
PDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRG
IGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVI
GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR
FEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQK
RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQI
HLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDP
APPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQR
AGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMD
APPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLT
IVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFI
QARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTL
IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPT
KLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctccaccaaaaccatctacgagcaaagaaacagttgtcaaacccaaatcggag
aaggaaaagttgaaggaattgtttccagctctttgcaggccagacaatcccaacatcagg
aatatgctggatgaagatgatgtgaaagtggcagctgatgcacttaaagaactggaagcc
ctgatgcctagtgcagacaggcaaggcaagcaaaggagcagtgaccaccgggcaaagaga
aagaggaggagcagaagccgtagcagggacaggaaacgaagacacagatctcgctctagg
tctcgttctaggacttgggataagagcaggggaaaatccagataccgatcaaggagcaga
agtcagagtcctagtagggaccataaggatcgagataagtacattgagaggagcaatgag
agatggagagacaagcacatagaccgtccacctcctgaggagccttccattggagacatt
tacaatggcaaagtcacgagtataatgcaatttggatgctttgtgcagctggaaggacta
aggaagcgctgggagggcttggtgcacatctcggagctgcggcgggagggacgggttgcc
aatgttgccgatgttgtgagcaaaggacaaagagtaaaagtcaaagtgttgtcctttact
ggatccaaaactagcctgagcatgaaggatgttgatcaagacactggggaagacttgaac
ccaaaccggaggagaaacctggttggagaaaccaatgaagaaacctctatgagaaaccca
gacagacccagtcacctgtctttggtgaatgccccagaggtggaagatgatagccttgaa
cggaaacgcctgacccgaatttcagacccagagaaatgggaaataaaacagatgattgca
gctaatgtgctttccaaagaagagtttcctgactttgatgaggaaactgggatccttccg
aaagttgatgatgaagaagatgaggaccttgagattgaattagttgaagaagagccacca
ttccttcgaggtcatactaaacagagcatggatatgagtcccatcaaaatagtaaagaat
ccagatggctccttgtcccaggctgcaatgatgcagagtgctttagctaaagaacggcga
gagcttaaacaagcacagagagaggcagagatggattctatcccaatgggactcaacaca
cactgggtggatcctctccctgatgtggatggaagacagatagctgcaaacatgcgagga
attgggatgatgccaaatgatatcccagagtggaagaaacatgcatttggtggaaacaaa
gcttcttatggtaagaagacccagctttccatcattgagcagagagagagtctgccaatc
ttcagattgaaggagcagctgatacaggctgtgcatgacaaccagattctgattgttatt
ggagagacaggatctgggaaaacaacacagattacccaatacctggctgaggcggggtat
acgtcaagaggaaagattgggtgtactcagcctcgcagagtggccgcgatgtctgttgca
aagagggtgtcagaggagtttggttgctgcctgggacaagaggttggctacaccattcga
tttgaagactgcactagccctgaaactgttatcaaatacatgacagatggtatgttactg
agggagtgcctgatagatcctgatctgacccagtatgccattatcatgctggatgaagca
cacgagaggaccatacatacagatgtgctctttggactcctgaaaaagacagtgcagaag
cgacaggacatgaagttgatagtgacgtcagcaacactggatgctgtgaaattctctcag
tatttctacgaagcgccaatcttcacaattcctggcagaacatacccagtagaaattctg
tacacaaaagagccggagacagattatttggatgccagtctgattacagtaatgcagatc
cacttaactgagccaccaggtgacattttggtgtttctaacgggtcaggaagagattgac
actgcctgtgaaatcctctatgagagaatgaaatctctaggacctgatgttccagagtta
attatcctaccagtatattcagctttacccagtgaaatgcaaaccaggatctttgaccca
gccccaccaggaagcagaaaggttgtcatcgccactaacattgctgagacgtctttgact
attgatgggatatattatgtagttgatcctggctttgtaaagcagaaagtttataactcc
aagactggaattgaccagctcgttgttacaccaatttcacaggctcaagcaaagcagcga
gcaggaagggctgggagaacagggccaggaaaatgctataggttatatacggagcgtgct
tatcgagatgaaatgctaaccaccaatgtgcctgaaatccagagaactaatctggccagt
acagtactttctctgaaggctatgggcatcaatgacttgctctcctttgactttatggat
gctcccccaatggaaactctcataactgccatggagcagctgtacaccctgggagctctg
gatgatgagggactacttactcgacttgggcgcaggatggcagaattccctttggagcct
atgttgtgtaagatgttgatcatgtctgtacatctgggatgcagtgaggaaatgctgaca
atagtgtccatgctgtctgtacagaacgtgttttacaggccaaaggacaagcaagcactt
gctgatcaaaaaaaggccaagttccatcagacagaaggtgaccacctcactctgctggct
gtgtacaattcctggaagaataataagttttcaaatccctggtgctatgaaaattttatc
caggcccgatccctacgcagagcacaggacatccgcaagcagatgttgggcattatggac
aggcacaagctggatgtggtatcgtgtggtaaggcaacggttcgagtccagaaggccatc
tgtagtggcttcttccgaaatgcagcaaagaaggatccccaggaaggttatcggacactc
attgatcaacaagtcgtctatatccacccgtccagtgctctcttcaacaggcagccagaa
tgggtggtgtaccatgaattggtactgaccactaaagaatacatgcgtgaagtgacgact
attgatcctcgctggttggtggaatttgccccagctttcttcaaggtttctgatccaacc
aagctgagcaaacagaaaaagcagcagcggctggagccgctgtacaatcgctacgaggag
cccaatgcttggaggatatcacgcgcattcagacggcgatga
DBGET
integrated database retrieval system
