Merops nubicus (carmine bee-eater): 103776421
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Entry
103776421 CDS
T08417
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103776421 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnb03021
]
103776421 (CPSF3)
03019 Messenger RNA biogenesis [BR:
mnb03019
]
103776421 (CPSF3)
Transcription machinery [BR:
mnb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103776421 (CPSF3)
Messenger RNA biogenesis [BR:
mnb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103776421 (CPSF3)
U7-dependent histone pre-mRNA processing factors
103776421 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
103776421
NCBI-ProteinID:
XP_008942180
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
SYIYIACFVLILVTLISLCRGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYID
LIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNIS
ADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYT
GDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGL
IPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQI
NINNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGY
CVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILV
HGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQ
GQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKLTGDV
EEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKIQKAA
VQKISKKVDMDVYRKRMEIMLQDMFGEDCVSSKDGAVLCVTVDGKTANLSLDSRTVDCEP
GSEDDESLREMVELAAQRLYDALSPVC
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
agttacatctatattgcgtgttttgttctaattttggtgactttgatatccctttgcagg
ggtgctggccaagaagtaggaaggtcatgcattattctggagtttaaaggaagaaaaata
atgcttgactgtggaatccatcctggactggaaggaatggatgcgcttccttacattgat
ttgatagatcctgctgagattgatctcctcctcattagtcatttccatttagatcactgt
ggggctttaccatggtttttgcagaaaacaagttttaaaggaaggacatttatgactcat
gccacaaaggctatttacagatggcttctttcagactatgtcaaagtcagtaatatatca
gcggatgacatgctgtatacagaaacagaccttgaagaaagcatggacaagatcgagacc
atcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgttaccacgcaggc
catgttctgggagcagccatgtttatgattgaaatagctggtgtgaagcttttatataca
ggtgatttctcaagacaggaagacagacatctgatggcagctgagattcccaatattaaa
cctgatattcttataattgagtccacgtatggaacccatatccatgaaaaaagggaagag
cgagaggcaaggttctgtaacactgttcatgacattgtcaacagaggaggcagaggtctc
atacctgtgtttgccctgggccgagctcaagagctacttttaattttagatgaatactgg
cagaatcatcctgaactccatgacatccctatctactatgcctcttctttggcaaagaag
tgtatggcagtttatcagacgtacgtcaatgccatgaatgacaaaatccgcaagcagatt
aacatcaacaatccatttgttttcaagcatattagtaatctgaagagtatggatcatttt
gatgatattggcccaagtgttgtgatggcttccccaggtatgatgcagagtggcttgtcc
agagagctgtttgagagctggtgcacggataagaggaacggagtaattatagcagggtac
tgcgttgagggaacgcttgccaagcacatcatgtctgaacctgaagagatcacaactatg
tcagggcaaaagctcccactgaagatgtctgtggattacatttctttctctgctcacaca
gattatcaacaaaccagtgaatttatccgggccctgaaacctccacacgtgattttagtt
catggtgagcagaacgagatggcccgactgaaggcggcgttgatacgggagtatgaggat
aacgatgaagtccatatagaagtccataaccctcggaatactgaagctgtgacattaaac
ttcagaggagaaaaacttgccaaggtgatgggatctttagcagataaaaaaccagagcaa
ggacagagaatttctggaatcctagtgaaaagaaacttcaactatcacatcctttctcca
tgtgacctctccaattatacggacttggcgatgagcactgtaacacagacacaagccatt
ccatatacaggcccttttaatctgctttattatcagctacaaaaacttactggtgatgta
gaagaaatagaaattcaacaaaaaccagccctgaaggttttcaaaaatattactgtgatt
caggagccaggcatggtagtccttgagtgggtggcaaatcctgctaatgatatgtatgca
gacaccgtgacaacagtgatactggaagttcagtcaaatcccaaaatacagaaagctgca
gtacagaaaatttcaaaaaaagtagatatggatgtgtataggaagagaatggagatcatg
cttcaggacatgtttggagaagactgtgtgagctcaaaggacggggcggtgctgtgcgtc
acggtggatgggaagacagcgaacctctctctggactcgcggacagttgactgtgagcca
ggaagtgaagatgacgaatcccttcgtgaaatggtggaactggctgcacagaggctttat
gatgccctcagcccagtatgttaa
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integrated database retrieval system
