Merops nubicus (carmine bee-eater): 103776996
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Entry
103776996 CDS
T08417
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4C-like
KO
K20163
DENN domain-containing protein 4
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnb04131
]
103776996
Membrane trafficking [BR:
mnb04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
103776996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
103776996
NCBI-ProteinID:
XP_008942778
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTTTLLDQEISRHETKAPITDIAVIIKSAGETVPEGYTC
VEATPTALQANLNYGSLKSPELFLCYRRGRDKPPLTDIGVLYEGKERIISGCEVIQATPY
GRCANVNNSSASSQRIFITYRRAPAVRPQNSLAVTDICVIVTSKGETPPHTFCKVDKNLN
CGMWGSSVYLCYKKSVPASNSLAYKAGLIFRYPQENYESFPLSESVPLFCLPMGATIECW
DPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQWQLGLLTAVERKVVT
SKSINSNKCICLLSHWPFFDAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPFPSPQR
PRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKILLHSL
RPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLNAPLPFIVGVDSRYFDLYDPPQD
IVCIDLDTNMVYISDDKKSSNWKQFPKKPCKCLLSTLKKLHPQLAAVHRKTQEGSAVEMT
PIEADFSWQKKMIELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSLFDHQG
FLKSRDRAYTKFYTHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGTEKGEK
VDVDSVEDARLIELDESQKSEHTVFIMPPEPPADDGQNRVPKYSYKNFPRLDVKLFDRPQ
ELKLSFSRHPVGSSISNSPALMAKRTKQEIKTAHKLAKKYYVSPPQWAKCLFSHSYSLWF
ICLPAYIRVAHPKVKALQQAYDVLIKMRKTEVEPLDEVCYRVVMQLCGLWGQPVQAVRVL
FEMKNAGIQPNAITYGYYNKAVLESPWPSSNRSGTFLWTKVRNVVRGTAQFRQCLKKSTQ
SPQVPLIPGGQSDQGYGSKDELLRGDGDSLHAIETQVEKGFSSKAEDLIGEVCTETSDEK
QQLNTETHNPTDPPPWGNSIVKVPSGIFDSSGRKSSAGSSPLFITQDSVEDVVFGDVSPK
KTSEKGQKRQKLFSERSCSFSSESXXXXXXXXXXGMLLKKGSLDLHSKEIAIMMGADAKI
LTAALSGAKTPQCPMNKSHSFESIVDQHGSGISSTWSCVTESSWELEHRSSPVLEEPVEG
QEHLENGREENMAIVEDVNLGHSAESKTQKLEPQDATTKRNSFYGVVKPIEREDVEVGLD
PLSLLATDSMQPRHPEPEEKLVSPIAARNLADEIESYMNLKNPLGSKFPSMELHKPGREA
EASDTRGHSQERRSSLPLDPVLQSPKSYENRRSPSVSRSKTFTGRPKQQTHPRAPKERSA
SLTGLGRSSPHGSLGSVVTTLSSLKLDSILSGPKIDVLKSGMKQAANVASKMWGVVTSAY
SYSDDEEESNQPDNFPAGFEDNILGDNLSSRAGVPGLMTNELAQSTASLGSSSSSGDAGR
QHYSTGEVSFPRSMKVLDSEKSEHSSSHTTSLSSIFQNYAMEVLMSSCSQCRACGALVYD
EEIMAGWTADDSNLNTTCPFCKSTFLPLLNVEFKDLRGSASFFLKQSTSGDSLQSGTLPL
TTDPVEQKLMSSPAVADLISFSDQPQPSHTIAEESSSAAEQSDVAEEQNKDPITMKTSAN
NPPKRGVSLTRSHSVGGPLQNIDLSQRPSHGISTVSLPNSLQEVVDPLIKRPNPLAVSVP
YLSPLVLRKELESLLENEGEQVIHTSKFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSE
HCNDGVQLPLTSLAQDSKLVYIHLLWDNINLHQEPGEPLYMSWRNLNSSEKRPSTMAEDQ
EATNTLLENIKLSIQHNNVVKPIHLLLQKVKPDVKRQRSFYREILFLSLVSLGRENIDIE
VFDSEYRLAHKNLPKDVLEKMQKIDAPPSSRVECCRKCFGAPLI
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccccgagtggctgactactttgtagtagcagggctcactgac
actgacaccacaaccctcctggaccaggaaataagccgacatgaaacaaaggctccaatt
actgacattgctgtgataattaaatcagctggtgaaactgttccagagggatacacctgt
gttgaagctacccctacagcccttcaggccaacctaaactatggaagtctaaagagtcct
gaactttttctttgctacaggagaggccgggataaaccacctcttactgacattggagtt
ctgtatgaagggaaagaacgcatcatttcgggctgcgaggtgattcaggccacgccttac
ggccgctgcgccaacgttaacaacagctcagcctcctcgcagcgcatcttcatcacgtac
cgcagggctcctgccgtgcggcctcagaactcgttggcagtgacggatatctgtgtcatt
gtaaccagcaaaggagaaaccccacctcacacgttttgcaaagttgataagaatttaaat
tgtggtatgtggggttccagtgtatacctttgttataagaagtctgtgccagcttctaac
tctctagcatataaagctggcttaattttcagatatcctcaagagaactatgaatcattc
ccactgtcggaatctgtacctctcttctgccttcctatgggagctactattgagtgctgg
gaccctcaaaccaaatatccactaccagttttctcaacgtttgtactgacctgttcctct
gcagaaaaggtttatggtgctgctattcagttttatgagccatatccccgggagctgctg
acagaaaaacagcaatggcagctgggtcttctgacagctgtggagaggaaagtggttact
tcaaagtccatcaattccaacaaatgcatctgccttctgtcacattggcctttcttcgac
gcgtttcgaaaatttctgatgttcatctataaattgtctgtctctggacctcatcccctt
cccattgaaaagcacatttcccattttatgcacaatatacctttcccttcaccacaaagg
ccaagaattcttgtgcagctttctgcccatgatgcattaatattgtctcagccagtttct
acaccgttgccattaagcggagcaaacttcagcactctgctaatgaatcttggaccggaa
aactgtgccactctgttactctttgtattactagaaggcaagatcctcctccattctctt
agaccagctgtgctgacaggagttgctgaagctgtggtagctatgatatttccatttcag
tggcaatgtccatacatccccctctgccctttgtctctggccaccgtgctcaacgcacct
ctgccctttattgttggcgttgattcacgatattttgatctctacgatccacctcaggac
atcgtgtgcattgacttagacacgaacatggtgtacatatcggatgataagaaaagcagc
aactggaagcagtttcctaagaagccatgtaaatgtctgctcagcaccttaaagaaactg
cacccacagctggcagcagttcacaggaagactcaagaaggctctgcagtagagatgact
cctattgaggctgatttctcctggcagaagaagatgatagaacttgagatggagatccag
gaagcttttctccgtttcatggcatctattttgaagggttacagaacattcctcaagcca
atcacgcaggcgccttcaaataaagcaactgctgctgattccttgtttgatcatcaagga
tttttaaaaagcagagaccgcgcatatacgaagttctacacacacctcaccaaaacgcag
atattcagccgctttattgaagagtgcagtttcgtgagtgacaaagataccggcttggcc
ttttttgatgactgcatagaaaagctctttccagataaaggaacagaaaaaggagagaag
gttgatgtagattctgtcgaagatgcacggttgattgaacttgatgaatcacaaaaaagt
gaacacacagtgttcataatgccaccagaacctcctgctgatgatggacagaaccgagtg
ccaaaatacagctataaaaactttccacgactagatgtcaagctgtttgacaggccacag
gagctcaagctctccttcagcagacacccagttggaagcagcatttcaaatagtccagca
ctcatggcgaagaggacaaaacaggagataaaaacagcccataaattagctaagaagtat
tatgtaagccccccgcagtgggctaagtgtctcttcagtcatagttacagcctgtggttt
atttgcctgccagcctacatcagagttgcacatcccaaggtcaaagcactgcagcaggcg
tacgatgttctgattaaaatgaggaaaactgaggtggaaccactagacgaggtctgctac
agagttgtaatgcagctctgtgggctgtggggtcagcctgttcaggctgtgagagtcctc
tttgaaatgaaaaatgctggaatacagccaaatgccatcacctatggttattacaataag
gcagttttagagtctccttggcctagcagtaaccgcagtggcacgttcctgtggacaaag
gtacgaaatgtggttcgtggcacagcacagtttaggcagtgcttaaagaaatcaacgcag
agcccacaagtacctctgataccaggtggtcagtcagaccagggctatggatcaaaggat
gaacttttaagaggtgatggggatagtcttcatgcaattgaaacacaagtggagaaaggt
ttttcttctaaagctgaagacctaataggagaggtttgtactgagacatctgatgaaaag
caacagctgaatacagaaactcataatccaacagacccacctccttggggtaacagtatt
gtgaaagttccatctggcatttttgatagcagtggaaggaaaagcagtgctggttctagc
ccactgttcataactcaggattcagttgaagatgtagtctttggtgatgtttctcctaag
aaaacaagtgaaaaaggacagaagaggcagaaactgttttcagagagaagctgcagtttc
agcagtgaaagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggaatgctgctgaaaaaa
ggcagcttggacttgcattctaaagaaatagcaataatgatgggagcagatgctaagatc
ctaacagcagctttatctggggccaaaactccacaatgtcctatgaataaatcccacagc
tttgaaagtattgttgaccagcatggttctggcataagcagcacttggagctgtgtgact
gagagcagttgggaattggagcataggtcctcaccagtgctggaagaacctgtggaagga
caggagcatcttgagaacggaagagaggaaaacatggccatagtggaagatgtgaacctt
gggcattcagctgagtctaaaacccagaaactagaaccccaagatgcaactactaaaagg
aatagcttttatggagtggttaagcctattgaaagggaagatgttgaagtaggtttggac
cctctatctttgctggctactgacagcatgcaaccaaggcatccggagcctgaggagaag
ctggtgtcaccaattgcagcacgtaatttggcagatgaaatagaaagctatatgaatctg
aaaaacccactgggtagtaagtttcctagcatggaactgcacaagccaggtagggaagca
gaagcctctgatacacgtggtcactcccaagagaggaggtcaagtctgcctttggatccc
gtcctgcaatcccccaagtcatatgaaaaccgtaggagtccttctgtctccagatccaaa
acgttcacgggacgacccaagcagcaaacccacccgcgggctccaaaggagcggtctgca
tctctgacgggactgggtcgctcctctccccacggctcgctgggctctgtcgtgacaacg
ctgtccagtctgaagttagacagcatactctccggacccaaaatcgatgtgctgaagtca
ggcatgaagcaggctgccaacgtggccagtaagatgtggggagttgtaacctcggcatac
agttactcagatgatgaggaagaaagcaatcagccggacaacttccctgctggttttgaa
gataatattttaggagataatctgtcatcaagagctggagtcccagggctgatgacaaat
gagcttgcacaaagcactgctagtcttggcagtagcagtagcagtggagatgcaggacga
cagcattacagcacaggtgaagtttcattcccaagaagtatgaaagttctagattctgag
aagtcggagcacagctcttcacatactactagtttatccagcatttttcagaactatgca
atggaggtattgatgtcaagctgctctcagtgtagagcttgtggtgctttggtttatgat
gaagaaattatggctggatggacagcagatgattcaaacttgaacactacttgtcctttc
tgtaaaagtaccttcctacctttacttaatgttgaatttaaagacctgcgtggctctgca
agttttttcctgaagcaaagtacctcaggagatagtttgcagagcggtactcttccatta
accacggatcctgtggaacagaaactgatgtctagtccagctgttgctgacttgatcagt
ttttcagatcaaccacagcccagccacaccatagctgaagaaagtagctctgcagctgag
cagagtgatgtggcagaggaacagaataaagatcccataaccatgaagacatctgccaat
aaccccccaaaaagaggagtgtccttgactcggagccacagtgttggaggtcctctgcaa
aacattgatctttcccagagaccgtcccatggcatttcaacagttagtcttccaaatagt
ttgcaagaagttgtggatcctttaataaaaagacctaaccctctcgctgtatctgtaccc
tacttgagccctttggttctgcgtaaggaacttgagtcactgttggaaaacgagggagag
caagtaattcatacatccaaattcatcaatcaacaccccataattttctggaacctagtt
tggtatttccgacggctggatctacctagcaacttacctggactcattctgacatctgaa
cactgtaatgatggagtgcagcttcctttgacatctcttgctcaagatagcaagctagta
tatatccatcttctatgggacaatatcaacctccaccaagagccaggggagcccctgtat
atgtcttggagaaatctcaattcttctgaaaagagaccctccacaatggcagaagatcag
gaggcaacgaacacactattggagaacatcaaactaagtattcaacacaataatgttgtt
aaaccaatccacctccttctacagaaggttaaaccagatgtgaaacgacagaggagtttt
tacagagagattcttttcctgtctctggtgtctcttgggagagaaaacattgacattgag
gtctttgacagtgaatacagacttgcacataaaaatttaccaaaggatgttcttgaaaag
atgcagaaaatagatgcgccaccaagcagcagggttgagtgttgtaggaagtgttttgga
gcacctttaatataa
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integrated database retrieval system
