Merops nubicus (carmine bee-eater): 103777341
Help
Entry
103777341 CDS
T08417
Symbol
COL4A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb04382
Cornified envelope formation
mnb04510
Focal adhesion
mnb04512
ECM-receptor interaction
mnb04518
Integrin signaling
mnb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103777341 (COL4A2)
04518 Integrin signaling
103777341 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103777341 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103777341 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103777341 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mnb04147
]
103777341 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
mnb00536
]
103777341 (COL4A2)
Exosome [BR:
mnb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103777341 (COL4A2)
Glycosaminoglycan binding proteins [BR:
mnb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103777341 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103777341
NCBI-ProteinID:
XP_008943142
LinkDB
All DBs
Position
Unknown
AA seq
1526 aa
AA seq
DB search
GPPGTLGVQGPVGPRGERGRPGPPGPPGPPGPQGNRGLGFYGEKGEQGPPGPPGPPGLPT
RELMGVPSDKHKGERGEPGPRGEPGIPGVLLYAPEKGEEGVMGFPGQRGLPGINGFPGLT
GDRGIPGFDGTPGGYGPRGSKGEPGEMGPPGPVSYFPSRIPRKGERGDPGFPGVPGLQGD
LGEEGDRGLPGLPGLSVDDGDKPGLPGEMGPKGEKGELGSPAYQEGPPGFPGKHGAPGPR
GPPGPAGTPGALFGLKGQEGAPGRFGVQGFPGPRGQKGPKGEEGDCTKCLLGEEMRRGST
GPPGPPGFPGTPGQAGRKGEPGDQGPHGLPGYPGVKGFAGQDGFPGPKGEKGDSFHITTK
GTKGLRGDPGLPGVRGEDGFPGRDGLDGLPGQPGPPGDGVRGFPGDPGYPGELGPKGFPG
EPGPPGEGLPGPKGYRGPPGDHGQGGNPGAPGLPGLPGEPGQLDCGQVIEDFSRGDGTEP
IWSGAGCVRPPKGSQGKPGLPGATGAKGARGFPGDPGPVGFPGLNGTRGDPGREGFPGPP
GFTGPRGDRGLNGLPGLQGHPGLTGKSGAPGAPGPKGFPGEVLGAPAGSRGDVGLPGFPG
LKGMPGDQGVPGIRGADGIPGLPGPKGDPGPQGLPGLMGLPGTMGTHGFPGPPGNRGPDG
RPGPQGPVGPPGARGEDGEQGFPGPVGMKGLSGDKGDTGFPGQQGIRGVTGPPGISGMDG
FPGDKGSRGSPGIDGFKGMTGLKGRPGIKGMKGEFGPLGPRGDKGSQGARGFKGDRGDRG
PPGEPPKIKPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGVPGRTGTPGSPGYPSYVA
GAKGDIGEKGLTGLKGYPGPAGSPGIRGFPGSTGSRGEKGVPGIAGQFGTPGSHGEIGER
GETINLXXXXXXXXXXXXGLKGEVGVPGLTGIRGSAGPKGEGGEPGLPGIEGLKGTQGVP
GSVGQKGLPGLVGPPGQQGSPGTPGFQGEKGTPGWPGLPGQAGLPGLRGISGLHGLPGTK
GLPGSPGPDGYGSAGLPGAVGDRGEPGEPSRVEGSRGPPGQKGDRGVPGVQGPFGIPSQD
GFPGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGAAAPPGSKGESGQIGLSGEIGPK
GSRGDPGLPGRPGAPGFPGPKGPRGEQGVIGFMGTVGIPGDLGPIGPKGDRGVTGFQGPP
GSPGLPPLPPRLVAEQGSPGPRGNIGPQGSPGDTGPQGPPGDPGFRGSPGEPGVPGRGGI
PAPPGSRGEQGAAGFQGPVGFEGQPGRPGSPGLPGMPGRSVSMGYLLVKHSQSDQEPMCP
VGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRNDKSY
WLSTTAPLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGWRSLWIGYSF
LMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIDQPFQS
KPSADTLKAGLIRSHISRCQVCMKNL
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
ggacctccaggtacgttgggtgttcaaggacctgttgggccaagaggagaacgaggaaga
ccaggaccaccagggcccccaggaccaccaggaccacaaggcaacagaggccttggcttc
tatggggaaaaaggagaacagggccccccaggtcctccagggccacctggacttcctaca
agagaactgatgggggtcccctctgacaaacacaagggtgaaagaggagagcctggacca
agaggagaacctggaattccaggtgtccttctctatgctcctgaaaaaggtgaagagggg
gtgatgggctttccaggacaaagggggctgcctggcatcaatggttttccagggctcact
ggagacagaggcattccaggattcgatggtaccccaggtggttatgggcctaggggaagc
aagggggaaccaggcgagatggggcccccaggaccagtttcctacttcccttcccgcatc
ccaaggaaaggtgaaagaggtgatccaggctttccaggtgttcctggactacagggagac
ctaggagaggagggagatcgtgggctgcctgggcttcctgggctctctgttgatgatgga
gataagccaggcttacctggagaaatggggccaaaaggtgaaaaaggtgaattagggtct
cctgcttatcaagagggcccccctgggtttccagggaagcatggagcaccaggaccccgt
ggtccacctggtcctgctggaacccctggtgctctgtttggattaaaaggacaggagggg
gcaccaggtagatttggtgtgcaaggtttccctgggccaagaggacaaaaaggacctaaa
ggtgaagagggggattgcaccaaatgcctcctgggtgaagagatgaggagaggctctact
ggtccccctggccctcctggctttccaggaacccctggccaggctgggaggaaaggagaa
cctggtgatcaaggaccacatggtctccctggctaccctggagtaaagggatttgcaggt
caagatgggtttcctggaccaaaaggagaaaagggagattctttccacataacaactaaa
ggcaccaaaggactccgaggagatcccgggctgcctggtgtcagaggtgaagatggtttc
ccaggcagggatggattagatggtttgccaggacaacctgggcctccgggtgatggggtc
agaggtttccctggtgatcctggctatccaggagaattaggcccaaagggttttccagga
gaaccaggcccaccaggtgaagggcttcctggcccaaaaggctatcggggtcctccaggt
gaccatggacaaggtggaaacccaggagctccaggtttgcctggtctgccaggagaacct
ggccaactagactgtgggcaggtcattgaggacttctctagaggagatggaactgagcca
atatggtcaggtgcaggctgtgtgaggccaccaaagggatcccaaggcaagccaggactg
ccaggagccacaggtgcaaaaggtgcaagaggattcccaggggatccaggtcctgtgggc
ttcccagggttaaatggtacccgaggtgatccaggtcgggaaggattcccaggtcctcca
ggttttactgggcccaggggagacaggggcctgaatggtctccctggactgcagggccac
ccaggcctgacagggaaatctggagctccgggcgccccaggacccaagggctttcctgga
gaagttctgggagcaccagcaggctcccgaggggacgttgggctccctggcttcccaggg
ctgaaaggcatgccaggagatcaaggagtaccaggaataagaggagcggatgggatccca
ggtttgccaggacccaaaggagacccagggccccaaggtctccctggtttgatgggcttg
ccaggaacaatgggaacacatggattcccagggccaccaggaaaccgtgggccagatggc
aggcctggccctcaaggacctgttggtccacctggtgctaggggagaagatggtgagcaa
gggttccctggccccgtgggcatgaaaggtctgtctggtgacaaaggagacacaggtttc
ccaggacagcaaggcatacgtggggtgactggcccccctggcataagtggcatggatggc
ttcccaggagacaaaggctcaagaggttcccctggcattgatggtttcaagggcatgaca
ggcctaaaaggaagaccaggcatcaaggggatgaaaggagaatttggccccctggggcct
cggggggataaaggctcccagggcgcacgtggctttaaaggtgaccgtggggatcgaggc
cccccaggagaacccccaaagatcaagcccagcatgatgatggaagttaaaggtgaaaaa
ggagacgttggagagaggggcacaaagggattctttggcttgaaaggcagcaagggaatg
ccaggtgtgcctgggaggacaggaaccccagggtctccagggtatcccagctacgtggcc
ggtgccaaaggagacattggtgagaaggggctgacagggctgaaagggtatcctggtcca
gctggctctcctggcatcagaggcttccctggcagcacagggagcaggggagaaaagggt
gttccaggaattgctggccagtttggtactcctggctcacatggtgagataggtgagcgt
ggagagaccataaacctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaggcctg
aaaggagaagttggtgtgccaggcttgacaggcataagaggaagtgcaggaccaaaaggt
gaaggaggtgaacccgggttacctggcattgaaggcctcaagggcacacagggtgtccct
ggctctgtgggacagaaaggtctgccaggactggttggccctccagggcagcagggaagc
cctgggacacctggatttcaaggtgaaaagggaactcctggctggccaggcttaccagga
caagcaggcttgcctggcctaagagggatcagtggactgcatggcttacctggcaccaag
ggcttaccaggatctccaggtccagatggctacggctctgcaggtctgccaggtgctgtg
ggggacagaggagaaccaggagagcccagcagggtggaaggcagccgagggcctccaggc
cagaagggggacagaggtgttccaggagttcaaggaccttttggcattcctagccaggat
ggatttccagggcctcctgggatttcaaatatatcaggatatcctggtgataaaggctcc
ccaggtctggatggagtgccaggctatccaggactacaggggcagcctggagctgcagct
ccaccaggaagcaaaggagaaagtggacaaataggtttgagtggagagattggcccaaaa
ggaagcagaggtgatcctggattaccagggagacctggagctcctgggttccctggacca
aaaggtcccaggggtgaacaaggtgtcattggcttcatgggcacagttggcatcccaggg
gatttgggacctattggacccaagggggacagaggagtaactggctttcagggccctcca
ggctctcctgggctgccccctcttcctccaaggctggttgctgagcaaggttcaccaggt
cctcgtggaaatataggccctcaaggaagcccaggagatacaggacctcagggcccacca
ggagatccaggtttcagaggctcccctggagagccaggagtcccaggcaggggtggcatt
ccagctcctcctggctccagaggtgaacaaggggcagcaggtttccagggtcccgtggga
tttgaaggtcagccaggccgccccgggagccccgggctgccagggatgccgggtcgcagc
gtgagcatgggctacctgctggtgaagcacagccagtctgaccaggagcccatgtgcccc
gtgggcatgaacaaactctggagtggatacagcctgctgtactttgaaggacaagagaaa
gcacacaaccaggatctagggctggctggctcctgcttggctcgttttagcaccatgcca
ttcctctactgtaacccgggggacatctgctactatgccagtcgaaatgataaatcctac
tggctctcaaccacggcccctctgcccatgatgcccgtggcagaggaggacatcaagccc
tacatcagccgctgctccgtgtgcgaggcccccgccgtggccatcgccgtccacagccag
gaagcctccatccctcactgccccgagggctggcgcagcctgtggattggctactccttc
ctcatgcacactgctgctggggatgaaggtggaggacagtccctggtttctcctgggagc
tgcctggaagatttcagggcgactcctttcatcgaatgcaacggtgcccgtggaacctgt
cactactttgccaataaatacagcttctggctcaccaccatcgaccagcccttccagagc
aagccctcagctgacacactcaaggcaggactcatccgaagccacatcagcagatgccaa
gtctgcatgaaaaacctgtag
DBGET
integrated database retrieval system
