Merops nubicus (carmine bee-eater): 103777678
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Entry
103777678 CDS
T08417
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnb04131
]
103777678
Membrane trafficking [BR:
mnb04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103777678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_N
VPS13_VAB
Motif
Other DBs
NCBI-GeneID:
103777678
NCBI-ProteinID:
XP_008943487
LinkDB
All DBs
Position
Unknown
AA seq
1829 aa
AA seq
DB search
FETKITSLEVTGMSREKSSPCLLSSRTAYSDESTSLLSIMFETNPLDEKADQRLRIESQP
LEIVYDAMTINSLVDFFRPPKDVHLEQLTSATLMKLEEFREKTSTGLLYVIETQKILDLK
INLMASYIIVPQKGFYDCTSNILLLDLGSLKMQSKSRSDISELKVGQSTIEDIMSRAYDS
FDIQLSSIQLLYSKHDENWQEARKLKYSSQHILQPLDVKVEFSRAMVVTDARMPKFKLSG
QLPLLSIQISDQKLTSILELIDSIPKPESAPATSFLPKTTEAAISPVLSAPHLSQGVLPV
LDLHSFAESESEEEFYDALSSPVEDMPFFEATSGSLKRASSTRRKKLRKQESLKNMTEFQ
LRFEVAEVLIKLCHLTGNTETPMLQLGIVGLGTELKLRTFDMTANAFLREVYLLCPEYMD
DNNKPVYIITTLDNVEDDLLTLEYIKADINGPELKTLYQNVLQKIKVNFSSLDIHLHTEA
LLTAMNYLNNLLPKQETKVAEEPVHEKIEERKDVLKKLTSKKSKYEDVIDLNICADLSCL
RIFIREKKHRIAEIHIEGLDSQVIMKKTATEVTAKLKNIIIVDSDEAALYKKALYITGKE
VFNFRIISYMNATDGTAYTNMDVVDNRIYLTVGCIQVVFVNKFVSSILAFINNFQAAKEA
LTEATVQAAEKAATGVKELAERSSRLALDINIKAPVVIVPQSAMSANVLVADLGLITVKN
RFFIAKTKTRYNLPPVIDSMTVKLSELKLYRSCYEQDSLQTEVQLLQPLNLEVAVERNLA
AAWYNEVPDIEISVRLKPMNLILSQEDITTILRTLNENIGGSSDVPTSVPEPKDTASHCS
DMHSTSQHSAGVTVVTSAVVELHSPVKIKTTLKLDFRFDSLTLVLYSPNSKQVSNLDQRD
DLLKLAEFKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKATPRMVEMKHGFEKK
VMVDISYKQGRDGTALDVIVQEIYLCASMEFLLTVADIFLKANAESAAAQRNLKQSLPVK
EQAPVQPVSTMEMNIVVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPERYSMTAAVK
EIQMKACPFLPEKRKGNITTVLQPCDFFFEMKQSGTNPQTADLTIKSLTVKVSPIIINTV
ITITSALYQTAETTEEEISQIPPDLWNKKDIKNLKMWFLEESNRNEDTNPTPELIPTGES
LKVNIESVFLTLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLRSRLELEVHYFNEMFGV
WEPLLEPLEVEKTDFFKPWILEIKMKKKAKKAVVESDAEEEENYKVPEYKTVINVSSKDQ
LNITLSKCGLQMLSNLGKAFAEAASQTSDIFKKDRAPFVVMNSLGLPITVSPSDSFSVIN
VEFGAKLFHLRDGENLNMEFVRTKNESDQFTAMTTLSSKRFYIQICPHNHSMVEKIPLTK
VGRCIYRVRHEESGVERSIVCQIDTVEGSKMITIRSPVQIRNHFSIPLNIFEEGRCLGTA
LPENEFNVPLSSYRSILSLQPLATENGVGGEYDMCEGITFDEIMKNVDSLLQRKCQSMRS
SNDSLVINIVPVKDMLISSLSAEDQWDFPYVVHLWPSVLLRNLLPYQITYSVEGNGNKYD
TLQEGCSAQIHNAVLDQTKLELQLLNYLDQNWRSEYHIKSNLPEISFVTFCCVTELDKAE
LDIAVHVTYTAGQICXAVHSPYWMVNKTGRMLQYKADGIHRKHPPDYRKPLLFSFQPKNF
FQNNKVQLMVTDSELSDQFSLDTVGSHGSVKCKSHKKEYQVGVTINNSSFNITRIVTFTP
FFMISNRSKYTLEVAEEGKEKWIPIVLQQ
NT seq
5488 nt
NT seq
+upstream
nt +downstream
nt
atttgaaacaaaaattacttcacttgaagttacaggcatgtcccgagaaaagagttcacc
ctgtcttctctcttctcgaacggcctattcggacgagagcacctcactcttaagcataat
gtttgagactaatcctttggatgagaaagcagatcagaggcttagaatagaatcgcagcc
actggaaatagtgtatgacgcaatgacaataaattccttagtggatttcttcaggcctcc
gaaagatgtacacttagaacagctgacatctgcaactctgatgaagcttgaagagttccg
tgaaaaaacatcaacaggtttgttatatgttattgaaacccagaaaattcttgacctcaa
aattaacctcatggcttcatacatcattgttccacaaaaaggattctatgactgtacatc
aaatatactgcttctggatcttggtagccttaagatgcaaagcaaaagtcgttcagatat
atcagaactcaaagtgggacaaagcactattgaagatataatgtcaagagcttatgacag
ttttgatattcagctcagcagtatacagttactgtacagcaaacatgatgagaactggca
agaggctcggaagctgaaatactcatctcaacatatcttgcagcccttggatgtaaaggt
ggaatttagcagggctatggttgttacagatgcgagaatgcccaagttcaaattgtctgg
acagctgcctttactttctatccaaatatcagatcagaagctgacaagtatcttggagct
aattgatagcattcctaagccagaaagtgctcctgctaccagttttcttccaaaaacaac
tgaggctgcaatatcccctgtgctctcagcaccacatttatcacaaggtgtgcttcctgt
tttggatcttcattcatttgctgagtcagaatcagaagaagaattttatgatgccctaag
cagtcctgtagaagacatgccattttttgaagccacatctggttccctcaagcgagctag
cagtacaaggcgaaaaaaactacgtaaacaagaatctttgaaaaatatgacagaattcca
gctaaggtttgaagtagctgaggtcttgataaaattatgccatcttacgggtaatactga
gacacctatgctgcagcttggtattgtagggttaggcactgaacttaagttaagaacatt
tgacatgactgcaaatgccttccttcgtgaagtttatctgctgtgcccagaatatatgga
tgataataacaagccagtttacataatcactaccttggataatgtagaagatgatcttct
cactctggagtacataaaggctgacattaatggaccagaactgaaaactctttatcagaa
tgttctacagaaaataaaggtgaacttttcatctctagatattcatttgcacactgaagc
tctgctgactgctatgaactatctgaataatcttctacccaaacaagaaactaaagttgc
agaagaaccagtccatgaaaaaatagaggagaggaaggatgttcttaagaaattaacatc
aaaaaaatcaaagtatgaagatgttattgacctcaatatctgtgcggatttgtcttgttt
acggatctttattagagagaaaaagcacagaatagctgaaattcatattgaaggtctgga
tagccaagtgattatgaagaaaacagcaacagaagtgactgcaaaattaaagaacatcat
tattgtggattctgatgaggcagcattgtataagaaggctctttacatcacaggaaaaga
agtcttcaacttcagaattatatcatacatgaatgctacagatggcactgcgtatacaaa
tatggatgttgttgacaatcgtatttacctaactgttgggtgtattcaagtagtttttgt
caataagtttgtttcatctattttggcttttataaataactttcaagccgccaaggaggc
tcttactgaggcaactgtgcaagcagcagagaaagcagccacaggtgtgaaggagctggc
cgagcgcagctcccgcctggcgctggatatcaacattaaagctcctgttgtgatcgtgcc
acagtcagcgatgtctgccaatgtcctggtggctgatttgggtttaatcaccgtgaagaa
ccgattctttatcgctaaaacgaaaacacggtacaacctcccacctgtcattgactctat
gacggtgaaattgagtgagctaaagttatacaggtcatgctatgagcaggattcattgca
aactgaagtacagttgctgcagccactcaatctggaagtagctgttgaacgaaatttagc
tgctgcatggtataatgaagttcctgatattgaaatatctgtccgactcaagcctatgaa
tctaattctcagtcaggaagacattaccacaatattgaggacactaaatgaaaatatagg
tggaagctctgatgtgccaacatctgtaccagaaccgaaagatacagccagccattgtag
tgatatgcatagtacttcgcaacactccgcaggtgtaactgttgtgacatcagctgtggt
tgaattgcattcacctgtgaaaataaaaacaaccctaaaactggacttcagattcgactc
tctgactttagtattatatagtccaaattcaaaacaggtttcaaatttggatcagagaga
tgaccttttgaagcttgcagagtttaagttagttttgatgtcagctgctgtcaaaatgtt
atcagacggttcaatgaatgcttcagtcaagctggcaaactgtacattagatgataagag
acaatcaatccagaaggctacaccaaggatggtggaaatgaaacatggatttgaaaagaa
agttatggtggatataagctataagcagggaagagatggcactgctcttgatgtgattgt
tcaagagatatacctttgtgcaagcatggagtttctactgactgttgcagatatattctt
gaaggctaatgcagaaagtgctgctgcacagagaaatctcaaacagtcattacctgtaaa
ggagcaagcacctgtgcaacctgtatctacaatggaaatgaacattgttgttaaaaatcc
agagattgtatttgtggctgatctaacaagaagtgatgctcctgcattggtggttacgac
acagtgtgaggtcttcattaaaaatagccctgaaaggtatagcatgacagctgctgttaa
agagatacaaatgaaagcatgcccatttcttccagaaaaaaggaaagggaacattactac
ggtattacagccttgtgacttcttctttgaaatgaaacagtcaggtactaatccacagac
agctgatctaacgattaaatccctaacagtaaaagtttctccaataatcataaacacagt
aattactattacatcagccctttatcaaacagcagaaacaacagaagaagagattagtca
aattcctccagacttgtggaataagaaagacataaaaaatctaaaaatgtggtttcttga
agagtcaaatagaaatgaagatacaaatccaacccctgaactaattcccacaggagagtc
attgaaagtgaatatagaatctgtttttctaacccttgaagctggggttgggcaccgaac
tgtaccaatgcttttggccaagtcctcatttcttggagaagtcaaaaactggagtactct
aatcaacctacgttctcgtcttgagctagaggtacactattttaatgagatgtttggagt
gtgggaacctttgcttgaaccactagaggttgagaagacagattttttcaaaccatggat
tcttgaaatcaagatgaagaagaaggctaaaaaagcagtggttgaatcagatgcagaaga
agaagaaaactacaaagttccagaatataagacagtaataaatgtttcctcaaaagacca
gctgaacattacactatccaaatgtgggctacaaatgttgagtaatttgggcaaggcgtt
tgctgaagcagccagtcaaacttcagacatcttcaaaaaagatcgagcaccatttgtagt
aatgaattctttaggacttcccattactgtctcacctagtgattcctttagtgtcattaa
tgttgaatttggagcaaaactatttcatttaagagatggagaaaatctaaatatggagtt
tgtcagaaccaaaaatgagagtgaccagttcacagcaatgacaactctgagcagcaagag
gttttacattcagatctgtccacataatcattccatggtggaaaagattccactgacaaa
agtgggtcgatgtatttacagagtgagacacgaggaatcaggtgttgaaaggtccattgt
ctgccaaattgatactgttgaaggaagcaagatgataactatacgttctcctgtgcagat
aaggaatcatttttcaattccattaaatatttttgaggaaggaagatgtttagggactgc
tttgccagaaaatgaattcaacgtaccattgtcctcttacagatccatactaagtttgca
accgctagctactgaaaatggagtgggtggagaatatgatatgtgtgaaggaattacatt
tgatgaaataatgaaaaacgttgacagtttattacaaaggaagtgccagtctatgaggtc
aagtaacgactcgcttgtcatcaatattgttcctgtaaaagacatgttgatatcctcatt
gagcgcagaagatcaatgggattttccatatgttgtacatttatggccttctgttcttct
ccgcaatcttcttccttatcaaataacttactctgtagagggaaatgggaacaaatatga
cactctacaagaaggatgttcagctcagattcataatgcagtcttggaccaaacgaaact
agagttgcagttgcttaactaccttgatcaaaactggcgaagtgaataccatatcaaaag
caatctgcctgagatcagcttcgtgacgttctgctgcgtgacggagctggacaaggcgga
gctggacattgctgtccacgtgacctacacggcggggcagatttgcnccgccgttcacag
cccctactggatggtgaacaagaccggccgcatgctgcagtacaaagccgacggcatcca
ccgcaagcaccctccggactacagaaagccgctcctcttttctttccagcccaaaaactt
cttccaaaataacaaggtgcagcttatggtaactgacagtgaactgtctgatcagttttc
actggatactgttggaagtcatggttctgtgaaatgcaagagtcataaaaaggaatatca
agttggtgtcacaataaacaacagcagctttaatattactagaattgtaactttcactcc
attttttatgatctcaaatagaagcaaatacactttggaagtagctgaagaaggcaagga
aaagtggattcctattgttttgcaacag
DBGET
integrated database retrieval system
