Merops nubicus (carmine bee-eater): 103777901
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Entry
103777901 CDS
T08417
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnb04121
]
103777901 (PDZRN4)
Enzymes [BR:
mnb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103777901 (PDZRN4)
Ubiquitin system [BR:
mnb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
103777901 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ_6
PDZ
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
103777901
NCBI-ProteinID:
XP_008943713
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
VDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLSSEECRKIVLLVARPEMQLEEGW
LDDERNEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEKDSG
VGPTDESLRNDESSEQENAPEEQNSATLQGTRELGHSQDTLGSVELQCNESFVSGEYIES
DFIGNPEEECERFRQLLELKCKIRNHGEYDLYYSSSMIECNRREQDGVEHELQLLNEELR
NIELECQNIMQAHRLQKVRDQYGDIWALHDKGFRNYNTSIDVQRGKLDDIMEHPEKSDKD
SSSAYNTAESCRSTPLTVERSPDNSLQRMISITNRKNLRSTIVASQSASGQSNRETTSAK
TKPAEQNSAAENTALAPESSKFTDQEKQSSEHIPYLSPYHSSSYRYGNIPAHAKHYQSYM
QLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILKER
ALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKES
PQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVT
TV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gttgatccaaacagcattgctgccagagacggccggatccgtgaaggagaccgcattttg
caaataaacggccaagatgtccagaatcgggaagaggcagtggcattgctctccagcgaa
gaatgcaggaaaattgtcttgctggttgcaagaccagagatgcagctggaggaagggtgg
ctggatgatgaaaggaatgaattcttagaggagttaaatttggaaatgttggaagagcag
cacaatgaagccatgcagtacacagccaatgaggtggagcagccaaagaaacatgaagag
gaggatggcactacagacactgcaacctcatcatccaacaatcatgagaaggatagtggg
gtgggacctacagatgaaagtctgcgtaacgatgagagctcagagcaagaaaacgcacct
gaggagcagaacagcgctaccctgcagggcacacgggagctgggccacagccaagacacg
ttaggaagtgttgagctccagtgcaatgaaagctttgtttctggggaatacattgaatct
gatttcataggaaacccagaggaggaatgtgaaaggttccggcagctgttggaactgaag
tgcaagattcgaaaccatggggagtacgacctatattactcgagcagcatgatagagtgc
aacagaagagagcaagatggagtcgagcatgagctgcagctactcaatgaggaactgagg
aacattgaactcgaatgtcagaacattatgcaagctcaccggctccaaaaggtgagggat
cagtacggagacatttgggctttacatgacaaagggttcaggaattataacaccagcata
gacgtacaaagaggcaaactagatgacatcatggagcaccctgagaagtctgacaaggac
agctccagtgcctacaacacagctgaaagttgcaggagcactccgctgacagtggagcga
tcccctgacaactctctccagaggatgatcagcataaccaacaggaaaaacctgagaagc
acaatcgtggctagtcagtcagcctcaggacaaagcaacagggagacaacctctgccaaa
accaaacccgctgagcaaaacagtgctgctgagaacacagcgctggcaccagaaagcagc
aaattcacagaccaggaaaaacagagcagtgagcacattccctacctgtctccatatcac
agctcttcttacaggtatgggaatatacctgctcacgcaaagcattatcaaagctatatg
caactgatccagcagaagtctgctgtggagtacgcccaaagccagctcagcctggtgagc
atgtgcaaagactcgcagaagtgtgcggagcccaagatggagtggaaagtgaaaataagg
agtgatgggacgaggtacatcacaaagagaccagttcgagacagaatcctgaaggaacgt
gccttaaaaattaaagaggagcgcagtgggatgacgacagatgatgatacgatgagcgag
atgaagatgggtcgctactggagcaaagaagagcggaagcagcatttggtgagagctaag
gagcagaggaggcgtcgggagttcatgatgaggagcaggctggagtgtcttaaggaaagt
ccgcagagtggcagtgagggcaaaaaggaaattaatattattgaactgagtcacaaaaag
atgatgaaaaagagaaacaagaaaatcttggacaactggatgacaatccaagaactgatg
acacatggtgccaagtctccagatggcacaagagtgcacaatgcctttttatcagttact
actgtatga
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integrated database retrieval system
