Merops nubicus (carmine bee-eater): 103778403
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Entry
103778403 CDS
T08417
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103778403 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnb03041
]
103778403 (PRPF6)
Spliceosome [BR:
mnb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103778403 (PRPF6)
Complex C
U5 SnRNP specific factors
103778403 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
PRP1_N
TPR_19
HAT_PRP39_N
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
ARM_TT21_2nd
FAT
TPR_CcmH_CycH
T7SS_EccA1_N
ARM_TT21_C
ARM_TT21_5th
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
103778403
NCBI-ProteinID:
XP_008944238
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
ATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQTADDDDEDLNDTNYDEFNGY
AGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSD
LKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQSGENHTSVDPRQ
TQFGGSNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSG
QTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGK
LQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELET
DIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE
TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINRE
QWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYA
YALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDV
PAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKL
EWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEEQKELVERAREAYNQGLKKCPHSIP
LWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLWLESVRLEYRAGLKNIANTLMAKAL
QECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWF
HRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCDVSKDIENWQK
KIGEILVLVAAKLKNTF
NT seq
2755 nt
NT seq
+upstream
nt +downstream
nt
agccacagggttcaccacccgctccgacatcggccccgcccgcgatgccaacgaccccgt
ggacgatcgccacgcccccccgggcaagaggactgtgggggatcagatgaagaagaacca
gacggctgatgatgatgatgaagatctgaacgacaccaattacgacgagttcaatgggta
tgctgggagcctgttctccagcgggccctatgaaaaagatgatgaggaagcagatgccat
ttatgcagctctggataagaggatggatgaacgtaggaaagaaagaagggaacaacgaga
gaaagaggaaatcgaaaaataccgtatggagcgacccaaaatccagcagcagttctcaga
cctgaaaaggaagctggcagaggtcacagaggaggagtggctgagcatcccagaggtggg
tgatgccaggaacaagcgccagaggaaccctcgctatgagaagctgactcctgtgcccga
cagcttctttgcaaagcatttacagtcaggggagaaccacacctccgtggacccacgcca
gacgcaatttggtggatcgaatactccctatccagggggcttgaacactccatatccagg
aggaatgacaccaggcctcatgacacctgggacaggagagctggacatgaggaagattgg
ccaagccaggaacaccttgatggatatgaggctgagccaggtgtcagactctgtgagtgg
ccagactgtagtggacccaaaaggatatttgacagacttgaattccatgatccccacaca
tggaggagatatcaatgacatcaagaaagctcgtttgctcctgaaatcagtccgagagac
caatccccaccatccccctgcctggatagcatcagcccggctggaggaggtcactggcaa
actccaagtggctcgaaacctcatcatgaaaggaacagagatgtgccctaagagtgaaga
tgtttggttggaagctgctcgccttcagcctggggatacagcaaaggctgtggtggccca
ggctgttcgccaccttccacagtctgtcaggatctacataagggcagcagagctggagac
tgatatcagggccaagaaacgtgtcctcaggaaagcccttgagcacgtcccaaactcggt
gcgtctgtggaaggcagctgtggagctggaagaacctgaggatgccaggatcatgctgag
tagggctgtggagtgctgccccaccagcgttgagctgtggctggcactggcaaggctgga
gacctatgagaacgccaggaaagtcctcaacaaagcccgtgagaatatccccacggacag
gcacatctggatcactgctgccaaactggaggaggccaatggaaacacccagatggtgga
gaagatcattgacagagccatcacatccctgagggccaacggcgtggaaatcaacaggga
gcagtggatacaggatgctgaggagtgtgacaaagctgggagtgtggccacgtgccaggc
catcatgagagctgtgattgggattgggattgaggaggaagatcggaagcacacctggat
ggaagatgcagacagttgtgttgctcacaatgctctggagtgtgcccgggcaatttatgc
ctatgccttgcaagttttcccaagcaagaagagtgtgtggctgagggcagcttactttga
aaagaaccatggcaccagagaatccttggaggctcttttgcagagggctgttgctcactg
tcccaaagcagaagtgctctggctcatgggagccaaatcaaagtggctggcaggagatgt
gccagcagccagaagcattttggccctggctttccaggccaaccccaacagtgaggagat
ctggctggctgccgtgaagctggagtcagaaaacaatgagtatgaaagagcaaggaggct
gctggcaaaagctcgcagcagtgcccccactgcaagggtcttcatgaagtcggtgaagtt
agaatgggtgcttgggaacattgctgcagcccaggagctttgtgaggaagccctgaagca
ctacgaggacttccccaaactgtggatgatgaaaggacaaatcgaggaacaaaaggagct
ggtggagagagcaagggaggcttataatcaagggttgaagaaatgcccccattccatacc
cctgtggctcctgctgtccaggctggaggagaaagttgggcagctgactagagcaagagc
catcttggaaaagtctcgcctcaagaatccaaagaacccagatctctggttggagtctgt
gcgactcgagtacagagctgggctaaagaatattgcaaatactctgatggccaaggcatt
gcaagaatgccccaattcaggaatcctgtggtcagaggcaattttccttgaagcgcgacc
gcaacggaagaccaagagcgtggatgctctgaagaagtgtgaacatgacccacacgtcct
gctggctgtggccaagctcttctggagtgagcgtaaaataaccaaggcccgagaatggtt
ccacagaacagtgaagatagactctgacctgggggatgcctgggctttcttctacaaatt
tgagctccagcatggcacggaggaacaacaagaagaggtgaggaagcgctgtgagaacgc
tgaacctcgccacggggagctctggtgtgatgtctccaaggacatagagaattggcagaa
gaagattggagagattctcgtgctcgtggcagccaagctcaaaaacaccttctag
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