Merops nubicus (carmine bee-eater): 103778487
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Entry
103778487 CDS
T08417
Symbol
HPS5
Name
(RefSeq) LOW QUALITY PROTEIN: Hermansky-Pudlak syndrome 5 protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnb04131
]
103778487 (HPS5)
Membrane trafficking [BR:
mnb04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
103778487 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_EML_2
PEP5_VPS11_N
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR3_1st
Beta-prop_VPS8
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
103778487
NCBI-ProteinID:
XP_008944324
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MASVPVVPDSYSHVLAEFECLDPLLSALRLDSSRLKCTCLDVSKRWLALGTSGGGLNLIQ
KDGWKQRLFLTHKEGAVSRVACCLHDEDYVAVATSQGLVVVWELNQERHGKPERIYVSSE
HKGRKVTALCWDTTALRVFVGDHVGKVSAIKINTSKQGKAAAAFVMFPVQIITTVDSRVV
QLDYLDGRLLISSLTRTYLCDTERQKFWKIGNKERDGEFGACFFPVGRSSGNQQPLIYCA
RPGSRMWEVNFDGEVQSTHQFKQLLSAPPLPVVTLRLDPHYTSSSCXFPKLLYLSEHYVM
TWTERGIYIFLPQSVQVLLWSEVKDIQDIAVYKSELFCLHTNGKVVHLSLLLVDRCVERL
IRRGFWTLAARVCCLFQNSIISCRARKNLPVEKLEHLKSQLDASAQQDLISQLEELISKL
EPVDSACSSRRSSISSHESFSVLDSGIYRVISRRGSQSDEDSCSLHSTFSEDERLKEFPA
HQEDEPVELDTVPHASAAAEADRSETFLPFSIPLSFRSPSPLVSLQAVKESVSSFVRKTT
EKIEKIGTLHISPDTRGRQEAKDEEQLQELTVNLVASPQEEKELEPQSCRLPEEDHLRDL
KAATAEAIARLQDPLVLLEPQCMRRVLQEWLVCLEEKFGSKGHAASLVKRSKTGCAEDQR
AVLEENLQLDPPDGDPADKEQSSILEGCPEKEDTNGTCVSKTACDSSGDVKGPLDCSFQV
SPPCAIAPDVQKGLVELTTLCFELRVFSSGSGVAEEGSEGSLPLAASGTLACRFMQSYFF
LLDLKRLKQCILTMYAARPVVWETYLAGLKELTRHSPVALAMENGDMLKILKQLHDLGPW
GDSPLLLAHAQRLYEKFGEIALRPLIKFHPSILPSDIKQLCRNDPAHFLAYLDSLVKSKP
EEKRSSLLRSLLQPESVRLDWLCLAVSQDAPQRANTVDAEGNPRPRSHLFTWGYSQLILL
LIKLPADFATKEKMADICKSHGFWTGYLFLCLELDRRTEAFTNIAYLDDLSLLNGEDGSM
PESTAEWKLLLHLAAEHSAALHHDGPQNG
NT seq
3148 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgtgccagtggttccagactcctacagccatgtgttggcagagtttgagtgt
ttggatccgttgctttctgcactcaggctggattctagtcgtctgaagtgtacgtgtctg
gacgtgtcaaagaggtggctggccctgggcacttcaggaggagggctgaacctcatacag
aaagatggttggaagcaaaggctctttctcactcacaaggaaggggctgtgtcccgggtt
gcctgttgtttgcacgatgaagactatgttgctgttgccaccagccaaggtcttgtagta
gtctgggaactgaatcaggagcgtcatgggaagccggaacggatttatgtttcctctgag
cataaaggcagaaaagtcacagctctgtgttgggatacaactgcccttcgtgtttttgtg
ggagatcatgtgggaaaagtgtcagccatcaagataaacacatcaaaacaaggcaaggct
gctgctgcttttgtgatgttccctgtgcagatcataaccactgttgattctcgggtggtt
cagctggattatctggatggaaggctgctcatatcttcccttacacgcacgtacctgtgt
gatactgagaggcaaaagttctggaaaattggtaataaagaaagagatggagaatttgga
gcatgtttcttccctgttggaagaagcagtggaaatcagcagccattaatatactgtgct
cgacctggctcaaggatgtgggaggtgaactttgatggggaggtgcagagcacacaccag
ttcaagcagctgctctcagcaccacctctccctgttgttactctcaggctggatcctcat
tatactagttccagctgcnccttccctaagctactgtatttgagtgagcactatgtgatg
acttggacagaaagaggcatttatattttccttccccaaagtgttcaagtcttactctgg
agtgaagtaaaagatattcaggatattgcagtttacaaaagcgagttgttctgtctgcac
acaaatggaaaagttgtgcacctctccctgctgctggtggaccgctgcgtagagcgcctg
ataagaagagggttctggacccttgctgccagggtctgttgtctcttccaaaattcaatt
atttcttgcagggcaagaaaaaatttgcctgtagagaagctggagcacttgaagtctcag
ctggatgcctcagctcaacaagatctcatttcacaattggaagaactcatttcaaagttg
gaacctgtagattctgcgtgcagcagtagaaggagcagtatttcatcacatgaaagcttc
agtgtcttagactctggaatatatcgtgtcatcagtcgaagaggcagtcagtcagatgaa
gattcatgttctctccacagcacattctcagaagatgagaggcttaaagaatttcctgca
caccaggaggatgagccagtagaacttgacactgtacctcatgcgtctgcggcggctgag
gctgaccggagtgagacatttctcccattcagtatccctctgtcatttcgttccccatct
cctctcgtctctctccaagctgtcaaagaaagtgtttccagctttgtacgcaaaactact
gaaaagattgaaaagattggcacgcttcatataagtcctgatactagagggaggcaagaa
gcaaaggatgaggagcagctgcaggagctgactgttaatctggtggcatctccccaggaa
gagaaggagttagagccacagagctgccgacttccagaggaagaccatttaagagatctg
aaggctgcaacagcagaagctatagccagactccaggatcccttggttttgttagaacca
cagtgtatgagaagggttttgcaggaatggcttgtctgtctagaagagaagtttggcagc
aaagggcacgctgcttccttggttaagagaagcaagactgggtgtgctgaagaccagaga
gcagtcctggaggaaaacctccagctggatccccctgatggagacccagcagacaaagag
cagagtagtatcttggaaggctgccctgaaaaggaagatacaaatggaacctgtgtaagc
aaaactgcatgtgacagtagtggtgatgtgaaggggcctttggactgcagcttccaggtg
tcccctccatgtgccatagcaccagatgttcagaaaggtctcgtggagctgacaacgctg
tgttttgagctgcgcgtgttttcttctggaagtggtgttgctgaggaaggctctgaagga
agtctgccactagcagcctcagggaccttggcctgtaggtttatgcaaagctacttcttt
cttctggatttaaaaagactgaagcagtgtatcctgaccatgtatgcagccaggcctgtc
gtgtgggaaacctacctcgcgggactgaaagaactaactcgtcacagtcccgtggcttta
gcaatggaaaatggagatatgttaaaaatcctgaaacagctgcatgacctggggccctgg
ggtgacagcccactgttactggcacatgctcaaaggctttacgaaaaatttggggaaatt
gctcttcggcccctgataaagttccacccctctattttgccttctgatatcaaacagctt
tgcaggaatgatccagctcactttttagcctatttagatagtctggtgaaatcaaagcca
gaggaaaaaagatcatctctcctcaggtctcttctccagcctgaatctgtacgactggac
tggttgtgcttggcagtgtctcaggatgcaccacaaagagcgaatactgtggatgcagaa
ggaaatcccaggccacgatcacatctgttcacctggggctacagccagctcattctgctt
ttgatcaaactcccagcagattttgctacaaaagagaagatggctgacatctgtaaatca
catggattttggactggatatctttttctctgtctggagctggatagaagaacagaagcc
tttactaatattgcttatttggatgatttgagcctgttgaatggagaagatggttccatg
ccggagagcacggcagagtggaagttgctcctgcaccttgccgcagagcacagcgccgcg
ctgcaccacgacgggccgcagaacgggg
DBGET
integrated database retrieval system
