KEGG   Merops nubicus (carmine bee-eater): 103778875
Entry
103778875         CDS       T08417                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
mnb  Merops nubicus (carmine bee-eater)
Pathway
mnb03082  ATP-dependent chromatin remodeling
mnb03083  Polycomb repressive complex
mnb04110  Cell cycle
mnb04330  Notch signaling pathway
mnb04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:mnb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103778875 (HDAC1)
   03083 Polycomb repressive complex
    103778875 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    103778875 (HDAC1)
   04350 TGF-beta signaling pathway
    103778875 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    103778875 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mnb03036]
    103778875 (HDAC1)
Enzymes [BR:mnb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103778875 (HDAC1)
Chromosome and associated proteins [BR:mnb03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     103778875 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     103778875 (HDAC1)
    BRAF-HDAC complex
     103778875 (HDAC1)
    REST complex
     103778875 (HDAC1)
    SHIP complex
     103778875 (HDAC1)
    MiDAC complex
     103778875 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     103778875 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103778875 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    103778875 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 103778875
NCBI-ProteinID: XP_008944742
LinkDB
Position
Unknown
AA seq 451 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAV
QEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEK
EEEEKKDEKEEEKPKEEKAEPKGVKEETKST
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaaccccacaggattcggatgacccacaacctactgctgaactatgggctctacagg
aagatggagatatatcgccctcacaaggcaaatgcagaagaaatgaccaagtaccacagt
gatgactacatcaaatttctgagatctattcgcccagataacatgtcagagtacagcaag
cagatgcaaagatttaatgttggggaggactgccctgtgttcgatgggctgtttgagttc
tgtcagctctctgctggaggctctgttgccagtgctgtgaagctgaacaagcagcagaca
gatattgctgtgaactgggcaggaggccttcaccacgccaagaagtcagaggcctctggc
ttctgttacgtcaacgatatcgtcttggccatcttggagctcctgaagtatcaccagaga
gtgctgtacattgacattgatattcaccatggagatggtgtggaggaagccttttacacc
acagaccgggtcatgaccgtgtccttccataagtatggagaatacttcccaggaacaggg
gacctgcgggatattggtgcaggcaaaggcaagtactacgctgtcaactaccccctgcgg
gacgggatcgatgacgagtcctacgaagcaatattcaagccagtgatctctaaagtgatg
gagacgttccagcctagcgcggttgtcctgcagtgtgggtcagattctctgtcaggggac
aggctgggttgttttaatctgaccatcaaaggtcatgccaagtgtgtggagtttgtgaag
agttttaacttgcccatgctgatgctggggggaggtggttacaccatccgcaacgtggcg
aggtgctggacctatgagactgcagtggctctggacactgagatccccaatgagcttcca
tataacgactacttcgagtacttcgggcctgactttaagctccacatcagtccctccaac
atgactaaccagaacaccaatgagtatctcgagaagatcaagcagcgtctctttgagaac
ctgcgcatgctgcctcatgcccctggcgtccagatgcagccaatccctgaggatgctgtt
caggaagacagtggagatgaagaggaagaagatcctgaaaaacgtatttcaatccgcaat
tctgataagaggatatcctgtgatgaggagttctctgactctgaagatgagggggaagga
gggcgcaaaaatgtcgccaacttcaagaaagcaaaacgtgtgaaaacagaagaggaaaag
gaggaagaggagaagaaagatgagaaagaagaggaaaagccaaaagaggagaaagcagaa
cccaaaggggtgaaggaggagacaaaatccacctaa

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