Merops nubicus (carmine bee-eater): 103779107
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Entry
103779107 CDS
T08417
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103779107 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnb03400
]
103779107 (MSH6)
DNA repair and recombination proteins [BR:
mnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103779107 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
WPP
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
103779107
NCBI-ProteinID:
XP_008944973
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MEGYPWWPCLIYNHPTERTIVRGKGKSARVHVQFFDDSPARGWISVKYLRPYKGSSDGEA
RKGGMFYSPKPEIKRAMALADDAMRKDTAQRLELAVCSEPSDTEEEEEEEVEMSESASGN
SDDCHSDEDVKSNKRVKRRESAVKSKRRRVVDSDSDHDGSDAEFKPDVKEAASSEEASSG
VDENESTDTETDAESVAESPIKIPSKRKRQEINKPAKRSSLGKECSEMPKRAATVSLEAK
SKLTSFAAPESFESQANTCSGGVGGFAAWEHEKLDWLQEGKKKDGRRRRQSDPDYDPRTL
YVPEDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKGTW
AHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMEARCKSMTHPTKFDRVVRRELCRI
ITKGTQTYSIMDCDPSENHHKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFSDDRH
CSRFRTLVAHYTPVQVLFEKGNLSVETQKILKGSLVACFQEGLVAGSQFWNASKTLKVLL
EEGYFKEKQNSENGCSLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLQKCLIDQ
ELLSLANFEEYVPVDVDTAKTMSSGSSFAKTGQRMVLDGVTLMNLEVLQNGTNGTTEGTL
LERIDSCCTPFGKRLLKQWLCAPLCNPQSINDRLDAIEDLVAVPDKMSEVSEHLKKLPDL
ERLLSKIHSIGSPLKSQNHPDSRAIFYEEVKYSKKKIADFLSALEGFKVMNEIVDVMEEI
ASDFKSKVLKQLVTRKANNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYD
KALQDIKAVEEDLQKYLDKQRKVLGTKSLLYWGAGKNRYQMEVPESAVSRNLPEEYELRS
SRKGYKRYWTKEIEKMLAAMVNAEERRDASLKDCMRRLFHNFDKNSRDWQAAVECIAVLD
VLMSLANYSQDGDGPLCRPEIILPVESSPPFLELKNSRHPCITKTFFGDDFIPNDIVIGC
KDENNSSEASCVLVTGPNMGGKSTLMRQAGLLAILAQLGCYVPAEVCRLTPVDRVFTRLG
ASDRIMAGESTFFVELSETSSILQHATKHSLVLVDELGRGTATFDGTAIASAVVEELAER
IRCRTLFSTHYHSLVEDHAHRGAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSY
GFNAARLANIPEEVIQKGHRKAKEFEKMTISLRIF
NT seq
3707 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatccttggtggccgtgtctcatatacaaccacccgacggaaagaacgata
gtcagaggaaaagggaaatccgctcgtgtccacgtacagttttttgatgacagccctgcc
aggggctggatcagcgtgaaatatctgagaccgtataaaggctcctcggatggggaggca
cggaagggaggtatgttttatagtccaaagcctgaaattaaaagggcgatggcgctggcg
gacgacgcaatgcgtaaagacacggctcagcggctggagctggcggtgtgcagcgagcct
tcagacacagaggaggaggaggaggaggaagtggagatgagtgaaagcgcctcaggcaac
agcgatgactgccatagtgatgaggatgtgaagagtaataagcgagtaaagaggagggaa
agtgccgtaaaaagcaaaagaagaagagtggtggactctgacagtgatcatgatggctct
gatgcagagttcaagcctgatgtgaaagaagcagcaagcagtgaggaagcgagtagtggg
gtggatgaaaatgaatctactgacacagagacagatgcagaaagtgttgcagagagtccc
ataaaaatcccttctaaacgaaagaggcaggagataaacaagcctgctaaaaggagtagc
ttaggaaaggaatgttctgaaatgcccaaaagagcagcgacggtttctttagaagccaag
tcgaagctgacatcatttgcagcacctgaaagttttgaatctcaggcaaacacttgcagc
ggaggcgtcggtggctttgcggcatgggagcacgagaagctcgactggctgcaagaaggg
aagaagaaagacgggcgcaggaggcggcagagtgaccccgactacgacccacgtactctg
tacgtgcccgaggactatctcaacaagtgtacgccagggatgcggaggtggtggcagctg
aagagtcaaaactttgatgctgtgattttctacaaagtcggaaaattctatgagttgtat
cacatggatgcggtcactggcgtgaatgagttgggcctgatcttcatgaaaggtacttgg
gcccactcaggttttccagaaactgcttttggcagattctctgatgttctggtgcagaaa
ggctacaaggtggcacgtgtggagcagacagaaactcccgaaatgatggaagcacgctgc
aagtcaatgacccacccaacaaaatttgacagggtggtacgccgggaactatgcagaatc
atcaccaagggaactcagacttacagcattatggattgtgacccctctgagaaccaccac
aaatacctcctgtgcgttaaggaaaaagaagactcctctggacaacgagtttacggggtc
tgctttgttgacacgtcggtggggaagttttatgtgggccagttctcagatgaccggcac
tgttcgaggttcaggactttggtagcacattacactcctgtacaggtgctgtttgagaag
ggaaacctgtctgtggagacacagaagatactgaagggctcacttgttgcttgctttcaa
gaagggctggtcgcaggttctcagttctggaatgcatctaaaacactaaaagttctcctt
gaagaaggatatttcaaggagaaacagaactctgaaaatggatgttctctgccctctgta
atcaagtctctgacttcagagagtgactcactgggattaactcctggagaaaacagtgaa
ttagctttgtcagctcttgggggctgtgtcttctatctccaaaaatgtctgatcgatcag
gagctattatcgctggcaaacttcgaggagtatgtccctgtggatgtggatactgcaaaa
actatgagttcaggtagttcctttgccaaaactggccagcggatggtgctggacggcgtc
accctgatgaacctggaggtcctgcagaacggcaccaacggaaccacagagggtactttg
ctggaaaggatcgattcgtgttgcacgccattcgggaagcgactcctgaagcagtggctc
tgcgccccgctttgcaacccccagtccatcaacgatcgcctggatgccatcgaggacctt
gtggcagtgccagataaaatgtctgaagttagtgagcacctgaagaaacttcctgacctt
gaaaggctgctcagcaaaattcacagtattggatcaccgctgaaaagtcagaaccatcct
gacagcagagccatcttttatgaagaagtcaagtacagcaaaaagaaaattgccgacttc
ttgtctgcactggagggatttaaagtaatgaatgaaattgttgatgtcatggaagaaatt
gccagtgacttcaaatctaaggtcctgaagcagttagtcacccgcaaagccaataatcca
gacggccgcttcccagacttgagtgctgagcttaaaagatgggatactgcttttgatcac
aaccaggctcgaaagacaggagtgattactccaaaggcaggttttgatcctgattatgat
aaagcattacaggatattaaagctgttgaggaagatcttcaaaagtacctggacaagcaa
cgcaaagtgcttgggacaaaatccttgctgtactggggggcgggcaaaaaccgctaccaa
atggaagtacccgagagtgcagtatcacgtaatttgcctgaggaatacgagctgaggtca
agcaggaaggggtacaaacgttactggaccaaggagatcgagaagatgctggctgccatg
gttaacgctgaggagcgccgagacgcgtccctcaaggactgcatgaggcgcttgtttcac
aacttcgataagaacagcagagactggcaggcagctgtggaatgcatcgctgtcttagat
gtcttgatgtccctggctaactacagtcaagatggggatggcccactatgccggcctgaa
atcatactgcctgtggagagttctcctcccttcctggaacttaaaaactcacgccaccca
tgcattacaaaaactttctttggggatgattttattcccaatgacattgtgataggctgc
aaagatgaaaataacagtagtgaagcttcctgtgtgttggtaactggcccgaatatgggt
ggcaaatctacgctcatgagacaggcgggtctcctggctatcctggctcagctggggtgc
tacgtccctgccgaggtctgcaggctgacgcccgtcgacagagtgttcacgcggctgggc
gcctcggacaggatcatggcaggtgaaagtactttcttcgttgaattgagcgagacttcc
agcattctccagcatgctacaaagcactcccttgttcttgtggatgaactgggcagaggc
acagcgacttttgatggcacagccatagcgagtgcggtggtggaggagctggccgagaga
atccggtgccggacgctgttctccacacactaccactcgctggtggaggaccacgcacac
cgcggggccgtgcgcctcggccacatggcatgcatggttgaaaacgagagtgaagatcca
agccaggaaacaattacgttcctgtacaagttcattgaaggagcatgtccaaagagctac
ggcttcaatgcggcaagactggctaatattccggaagaggttattcagaaggggcacaga
aaagcaaaagagtttgaaaaaatgaccatttcactgagaatctttag
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