Merops nubicus (carmine bee-eater): 103779277
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Entry
103779277 CDS
T08417
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb04140
Autophagy - animal
mnb04148
Efferocytosis
mnb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103779277 (VPS39)
04148 Efferocytosis
103779277 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103779277 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnb04131
]
103779277 (VPS39)
Membrane trafficking [BR:
mnb04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
103779277 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
TPR_Vps41
Clathrin
Motif
Other DBs
NCBI-GeneID:
103779277
NCBI-ProteinID:
XP_008945151
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
EWLLVGTKQGHLLLYRIKKDAVPGEVMSSESVCCNRFEVTLEKSNKNFSKKIQQIHVVSQ
FKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLKQSDTGEEVLRMCVAVRKKLQ
LYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQ
LEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYV
EIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFE
LALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPD
LLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLME
GTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSEL
IILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSVWVLRDF
PEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVWEETGAEFHNCLIQL
YCEKVQGLMKFPPDKTPVPAGEEGGDLGDYRKKLLLFLEKSTWYEPSRLISDFPFDGLLE
ERALLLGRMGKHEQALFIYVHILKDTNMAEK
NT seq
2078 nt
NT seq
+upstream
nt +downstream
nt
aggaatggctccttgttggtaccaaacaagggcatcttctgctttacaggatcaagaaag
atgcagtgccaggagaggttatgtcatcagaaagtgtctgttgcaataggtttgaagtga
cactagagaaatccaacaagaacttctcaaaaaagattcagcagattcatgttgtttctc
agtttaaaattctggtcagtctgttagaaaacaacatttatgtccatgacctgttgacat
ttcaacaaatcactacagtttccaaggcaaaaggtgcatctctcttcacttgtgatctca
agcagtcagatacaggggaagaggtgctgaggatgtgcgtggcggtgcggaagaagctgc
aactttatttttggaaggacagagagttccatgaactgcagggcgacttcagtgtccctg
atgtacccaagtctatggcctggtgtgaaaattccatctgtgtaggcttcaagagggact
attacctgatacgggtggatggaaaaggatccatcaaagaactgtttcctacagggaagc
agctggaaccattggtagctcctgtagcagatggaaaagttgcagttggccaagatgatc
taacagttgtgctcaatgaagaaggggtctgtactcagaaatgtgccttgaactggacag
atattcctatagccatggagcaccagcctccctacatcattgctgttctgccaaggtacg
tggagatccggacgtttgagccccggctgctggtgcagagcattgagctgcagaggccac
gcttcatcacttctggaggcacaaatattatatacgtggcaagcaatcactttgtttgga
ggctcattccagtgtccatagccacacagatccagcagcttctgcaggacaagcagtttg
agttggctttgcagttggcagagatgaaagatgattcagatagtgagaagcgacaacaga
ttcaccacataaagaacctgtttgccttcaacctcttctgccagaagcgctttgatgaat
ccatgcaggtttttgccaagcttggtacagatcccactcatgtgatgggtctgtatcctg
acctcctgcccacagattacaggaaacagctacagtatcccaaccccctgccagggctct
ctggggcagagctggagaaggcacatttagctctgatagactacctaactcaaaaaagaa
gtcagctggtgaagaagctaaatgattctgaccatcagtccagtacctcacccctcatgg
aaggaacacccacaatcaaatccaaaaagaagctgctacaaatcattgacaccactctgt
taaagtgctacctccatacaaatgtagcactggtggcaccattactacgcctggagaaca
atcactgccatattgaggagagtgagcacgtactaaagaaggcacacaagtacagtgagc
tgataatactgtatgagaagaaaggtctgcatgagaaagcattacaggtactggtggatc
agtcaaagaaagccaactcgcctttgaagggtcatgagagaactgtgcagtatctgcagc
atttgggaacagagaacttgcacttggtattttcctactctgtctgggtgctaagagatt
ttcctgaagatggactgaagatattcacagaagacctcccagaagtggaagctttgccac
gagacaaagtgctcagtttcttgatagaaaattttaaaagcttgactattccttatctgg
aacacatcattcatgtctgggaagaaacaggtgcagaattccataactgtctgatccagc
tgtactgtgagaaagtgcagggcttgatgaagttccctccagataaaactccagtgcctg
ctggagaggaaggaggagacttgggagattaccggaagaagcttctgctgtttctggaga
agtctacctggtatgaacctagtcgactaattagtgacttcccctttgatggtctcctag
aagaacgtgctctgctcttgggccgtatggggaagcatgagcaagctctgtttatttatg
ttcatattttgaaggacaccaacatggctgaaaagtaa
DBGET
integrated database retrieval system
