Merops nubicus (carmine bee-eater): 103781652 Help Entry 103781652         CDS       T08417                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism mnb  Merops nubicus (carmine bee-eater) Brite KEGG Orthology (KO) [BR:mnb00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:mnb03009]     103781652 (PDCD11) Ribosome biogenesis [BR:mnb03009]  Eukaryotic type   90S particles    Other 90S particles     103781652 (PDCD11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 HAT_Syf1_CNRKL1_N Spt6_S1 HAT_PRP39_N OB_RRP5_4th HAT_PRP39_C Suf TPR_14 HAT_Syf1_CNRKL1_C OB_RRP5 TPR_19 TPR_15 ARM_TT21_5th TPR_12 ARM_TT21 TPR_CcmH_CycH Motif Other DBs NCBI-GeneID:  103781652 NCBI-ProteinID:  XP_008947621 LinkDB All DBs Position Unknown AA seq 1833 aa AA seqDB search MASMEENFPRGGIQKKPTEGKTPSTKLERDNLFDVHHEEQSQKRKRSQSDQGKQKKFKAG STAAAKDNVVNIEPLTIEALCEGVLLLGCIKEVSDYELVVSLPNGLSGFVPVTHISDAYS KMLSKEVAQGELLEDLHSLSDMYSVGTLVRCIVTSVEKNADGRRSIKLSINPKKVNKGLN ASALAPGMLLSGFVSSVEDHGYLIDIGVNGTHAFLPRQKAQNYIKAVKRGPDLKIGQNLN CVVVEVKNEGRVVRLSVDRSEVAASVATEQQNWTLSNLLPGLVVKARVQKVAPFGIKLRF LSSFTGIVDFMHIDPEKSMNYSPDQVVKACILSIHPTSKVVRLTLRQAFLHPGGSPNQLS NDRMGAVVEQATVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFKPGAFKAGYKHKCR IIDYSLIDEMCIVSLKYQIIEARILQYQDIHTGDVVQGKVFALKPIGMQVKVADGIKGLV PSLHLADVILKQPEKKYSIGDEVKCRVLECNPAGRKLILTLKKSLVQSKLPVLSNYEDAK PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPVSCPEKIFHEGQVVKVMVLKCE PQQERLLLSFRLSSNPDSGDKEQHTPKKKQEVKYQIGEMVDVKVLKKKENGLEVSILEDE GSVIASIPTVHLSDFVGTCKLLWHCLQEGDVLPRVMCLSDKAERIILSRKAAVISAVQEE QVARSFSEIQPGMVLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQ TVIAKVMSTDEEKQRVLLSLKVSECSSGDSAAESFALLNQYFKEMKEIRNLLRRREPSVA RVLCELVPGKELQLVVQDVHEDGSALFSGSSVTGLTVTATRYHLGDKNIVPGEKMKALVL HVDVLASKVYVSLREELLKQRGKQLTENSQHSATVQHIAEEFALVSLETGQLAAVPIASH FNDTFRFDSEKLKVGQTISATLKAVKVNDHGVLLAVQGSAKKNVFVRIRNESETALEEML LAVKHSLSLGDTVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTYTLKAGQ KVTARVIGGREVNTQRYLPISHPHFTQSIPELSIRPSEIEGEVTAVLNLKEDSILKKLGL YKVGQTVTCFVKKYNILKNWLEVEVTPDIRGRIPHLLLSLNTKVLKHPEKSFKNGQAISA TVTGTDVTETNLCLSLTGIQLLEQGTTTVGMVTKMTPHVGLTIALPGGKTGKVSIFHLND TYMENPLGDFKVGKIVRCYILSNENGKIQLSLRQSRLNPKSNSKVEDVEITCVKDVKKGQ LVRGYVKSIGPSGVFFGLSTSLLGRILFQNVSPYFVQKQSLYEKYLPEGKLLTAKVLGVD GKHIELSLLPEDTGMSSVLPESLGLPRYGAEEEKKKADDRGKREELKLKTKRRRGNSESE QEAKPKKKKTGPADENDSGIEVYYREEEDDDQEEEETKEKSKVRKPGEAPRLQVSIGFTW DEDVNAGNMPVLNQKEESSESEEEEDLQSKLKKQTKKEKELERQKKEKELCKLEAALMDP SRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFREEQEKL NVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKYKKAEELYHTML KRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQLEFRFGDPE HAKALFESTLSSYPKRTDIWSIYMDIMIKHGSQKEVRDIFERVTHLSLAPKKMKFFFKRY LDYEKKFGTTESVLAVKRAALEYVETKSSLADT NT seq 5502 nt NT seq  +upstreamnt  +downstreamnt atggcatccatggaagaaaactttcctcgaggaggcatccagaaaaaacccacagaggga aaaacacccagcacaaagttagagcgagacaatttatttgatgttcaccatgaagaacaa tcccagaaaagaaaaaggagtcaaagtgatcaaggaaagcagaaaaagttcaaggcaggc agcacagctgctgctaaagataatgtggtgaatattgaaccactcacaattgaggcgctc tgtgagggggtgttgctcctcggttgtataaaagaggtcagtgactatgaactcgttgtc agcttgcccaatggactttcaggatttgtgccagtgactcatataagtgatgcctacagc aaaatgctgagcaaagaggtggcccaaggagaactcctggaggacttgcattctctctca gacatgtattctgtagggacactggtcaggtgcattgtgaccagtgttgagaaaaatgct gacggacgtcggagtatcaaattatcaatcaaccccaagaaggtcaataaaggtctgaat gcttcagcactagcacctggcatgctgctctctggctttgtgtctagtgtggaggaccat ggctacctcattgatattggagtcaacgggactcatgctttccttcctcgtcagaaagcc caaaattacatcaaagcagtcaagagagggcctgacttgaagataggccagaacctgaac tgtgtcgttgtggaggtgaagaacgaagggagagtggtccgtttgtccgttgatcgatca gaggtggctgcatccgttgcaacagagcaacagaactggacactctctaatttattgcca gggctggtggtgaaagctcgagtgcagaaggtggcaccctttggaatcaaactgagattt ctgtcttctttcactggcattgtggatttcatgcacatagacccagagaagtccatgaac tattctccagatcaagtggtgaaagcttgcatcctctctatccaccccacctccaaggtg gtgcggcttactctgcggcaggccttcctccaccctgggggatccccaaaccagctctcc aatgatcgcatgggggcagtggtggagcaagcaacagtgaaagctttctacaagcagttt ggtgccatctttgagcttgatgatggcactcttgcatttgcacggttgaaacatctttca aaaacgagaaaatcctttaaacctggagcatttaaggcaggatacaagcataaatgtcgg atcattgactacagcctgattgatgaaatgtgtattgtgtctctaaagtatcagattatt gaagcacgaattctgcaataccaagatatccacacaggggatgtggtgcagggcaaagtg tttgccctgaaacctattgggatgcaagtgaaagtggccgatgggattaaagggctcgtg ccatccctgcatcttgctgatgtgatcctgaagcagcctgagaagaagtacagcatagga gatgaagtcaagtgtcgggtgctagagtgcaatcctgcaggaaggaagctgatccttact ctaaagaaaagtctagtccaatcgaagcttccagttctctccaattatgaagatgcaaaa ccaggtctgatcacacatggctttgtggtgtgtgcaagggagtttggttgcattgtgaag ttctacaatgacgtcaaaggtctggtacccaagaatgagctgagttcagaacctgtatct tgtccagagaaaatcttccatgaaggccaggttgttaaagtaatggtcttaaaatgtgag ccccagcaggagagactcttgttgtccttcaggttatcaagcaatcctgactcgggtgac aaagagcaacatactccaaagaagaaacaggaagtgaaatatcaaataggagagatggtt gatgtgaaagtgttgaagaagaaagaaaacgggctagaggtttctatcttggaagatgaa ggcagtgtgatagcctcgattcccacagtacacctctctgattttgttggtacctgcaag ctcctgtggcattgtcttcaagagggagatgtcctgcccagagttatgtgcctaagtgac aaggcagagcgtattatcttgagcagaaaggctgcagtgatttctgctgtacaggaggaa caagttgcaagaagtttctctgaaatccagcctgggatggtgttgactggttatgtgagg aatgtgatgccctttggagtgtttgtggagttcccttttggtgtgacaggactggcaccc aaagtgagcatgagcgacaagtttgtgacggacaccaaggaccactttgtggtgggacag actgtgattgcgaaggtgatgagcactgatgaggagaaacagcgtgtgctcctcagtctg aaggtgtcagagtgcagctcgggcgattctgctgcagagagctttgccctgctgaatcag tatttcaaggaaatgaaggaaatcagaaacttgttgagaagaagagagcccagtgtggcc cgagtcctttgtgagttggtgcctgggaaggagctgcagctggtggtgcaggatgtgcat gaggatggctcagcactcttcagtggcagcagtgtcacaggcttgactgtcacagccact cgctaccatttgggagacaaaaatattgttcctggtgagaaaatgaaggcattggttctt catgtggatgtcctcgcatcaaaggtgtatgtttctcttcgggaagaactgttaaaacaa agaggcaagcaactcacagagaactcccagcactctgccaccgtgcagcacatagcagaa gagtttgccctcgtgtctttggaaacaggccagctggcagctgtccccatagcgtctcac ttcaacgacaccttccgctttgactcggaaaagctgaaggtgggacagacaatctctgcg accttaaaagcggtgaaggtgaacgaccatggagtcttgctagcagtacaaggctcagca aagaagaacgttttcgtaaggatccggaatgagtctgagacggcattagaagagatgctg cttgctgtgaaacactcgctttccctgggggatactgttactggtactgttaagtctgtc aaaccaacccatgtcacagttgctattgatgacaagctgacaggttcaatccatgcatcc cggattctggatgaagtgcctataggctcttttccgacatatactctgaaagctggacag aaggtgactgctcgagtcattggaggcagagaagtgaatactcaaaggtacctgcccatc agccatccacacttcacacagtccattccagagctcagcattcgaccaagtgaaatagaa ggggaagtcacagcagtgctgaaccttaaagaagacagtatcctcaagaaacttggactc tacaaagttggacagacagtcacatgttttgtgaaaaagtataacattctcaaaaattgg ctggaggtagaagtcacccctgacattcgaggaagaattcctcatctgctgctgtctctg aacaccaaggtcttaaaacatccagagaagagcttcaaaaatggccaggcaatatcagct acagtgactggaacagatgtcaccgaaacaaacctctgcttgtcactcacaggaattcag ttgctggagcagggcaccacaactgtaggcatggtaacaaagatgactccacacgttggt ttgaccattgctctgccaggtgggaagactggcaaagtcagcatctttcacctaaatgat acttacatggagaatcctctgggtgacttcaaagttggcaagattgtcaggtgttacatc ctctccaatgagaacggtaaaatccagttatctctccgtcagtcccggctaaacccaaag agcaacagcaaagtggaggacgttgaaataacgtgtgttaaggatgttaaaaaaggccag ctagtgagaggctatgtcaaatcaattggtccatcaggtgtattctttggcttgtccact tctcttctgggccgaatcttgttccagaacgtttccccgtactttgtacagaaacaatcc ttatatgaaaagtacctgcctgaaggaaagctgctcacggccaaggtgcttggtgtagat ggaaaacatattgagctctctctcctgccagaggacactgggatgtcaagtgtcttgcct gaatctctaggcctaccacgatatggtgcagaggaagagaaaaaaaaggcagatgatagg ggaaagagagaagagcttaagctgaagacaaaacggagaagaggaaactctgaaagtgag caggaggcaaagccaaaaaaaaagaagactggtccagcagatgaaaatgacagtggaatt gaggtatattaccgggaggaggaggatgacgaccaggaggaagaggaaactaaggaaaaa tcgaaggtaaggaaacctggtgaagctcccaggcttcaggtttccataggcttcacatgg gatgaggatgtgaatgcagggaatatgcctgtgctgaaccagaaggaggagagctcagaa agcgaggaggaggaggatctgcagtcgaagctgaagaaacaaacaaagaaggagaaggag ctagagaggcagaagaaggagaaggagctctgcaaattagaggcagctctgatggaccca agtagacagccccagtcagcagatgactttgaccgcctggtgctgagcagtcccaacagc tccatcctctggctacagtacatggctttccacctccaggctactgagattgagaaggcc agagctgtggcagagagagcacttaaaacaatctgcttcagggaagaacaggagaagctg aacgtctgggtagctctgctgaacttggagaacatgtatggcactgaggagacactgatg aaggtctttgagagagctgttcaatacaatgaacctttgaaagtcttccagcatctttgt gacatctatgccaattctgagaagtacaagaaagcagaagaattgtaccacacaatgctg aagcgtttccgtcaggagaagtccgtgtggctgaaatacgcctccttcctcctgaagcaa ggtcagactgaggccacacacaggcttttggagcgtgctctgaaggctttgcccaccaaa gaacacgtggatgtcatttcaaggtttgcacagctggagttccgttttggggacccagaa catgccaaggccctctttgagagcaccctcagcagctatcccaagcggacagacatctgg tccatctacatggacatcatgatcaaacatggcagccagaaggaagtacgagacatcttt gagagggtcacacacctgagcttggcaccaaagaagatgaaattcttctttaaacgctac ctggattatgagaagaaatttggtacaacagaaagtgtcctggctgttaaaagagcagca ctggagtatgtggagactaagagttcccttgctgacacctga

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