KEGG   Merops nubicus (carmine bee-eater): 103782197
Entry
103782197         CDS       T08417                                 
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39
  KO
K13217  pre-mRNA-processing factor 39
Organism
mnb  Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:mnb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mnb03041]
    103782197 (PRPF39)
Spliceosome [BR:mnb03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    103782197 (PRPF39)
SSDB
Motif
Pfam: HAT_PRP39_N HAT_PRP39_C Suf TPR_14 HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C TPR_16 TPR_12 Mad3_BUB1_I TPR_19 TPR_MalT ARM_TT21_N
Other DBs
NCBI-GeneID: 103782197
NCBI-ProteinID: XP_008948197
LinkDB
Position
Unknown
AA seq 669 aa
MENTESTEEEKPTVSNDSTDNGAEVPSEEQQMDFSTEIMSVTEMEQSPDSSPDLNEENTQ
ESEIPNLESLQTSDIEAGFPPDFDKFWKVVEDNPQDFTGWVYLLQYVEQENHLPAARKAF
DRFFTHYPYCYGYWKKYADLEKRHDNVKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLD
PADPETNSTIRGAYEHAVLAAGTDFRSDRLWEMYINWEDEQGNLREVTSIYDRILGIPTQ
LYSHHFQRFKEHIQNNLPRDFLTTEQFVQLRRELASVNGHGGEEAQPGEDLPCGTEDITD
PAKLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEAIKRPYFHVKPLEKIQLKNWKE
YLDFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLP
KKPMVHMLWAAFEEQQGNIDEARRILKNFEECILGLAMIRLRRVSLERRHGNMEEAEQLL
EDAFRNAKSATEASFYAIKLARHLFRVQKNLPKARKVLSEAIEMDKENTKLYLNLLEMEY
SGDLTQNEENILSCFDKAVHGALSMKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQALL
KEQDSLKRRAENGSEEPDEKKMLTDDPTLASAQMMDGDMQVSQAAYNYNAWYQYNYQNAW
NYGQYYHPT
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggagaacacggaaagcacggaggaggagaagcccactgtcagcaatgacagcacagac
aatggtgctgaagtgccctcagaggagcagcagatggacttcagtacagagatcatgagt
gtaactgagatggagcagtcgcctgatagttcccctgacctgaatgaagagaacacccaa
gagagtgaaattccaaatcttgagagtttacagacgtcggatatcgaggcaggcttccct
ccagattttgacaagttctggaaggtggtagaggacaatccccaggatttcacaggatgg
gtgtatctgctgcagtacgtagagcaggagaaccacttgccagctgccaggaaggccttc
gacaggtttttcacgcactacccatactgctatgggtactggaagaaatacgcagacctg
gagaagcgccacgacaacgtgaagcagtccgatgaggtttatcgcagagggctgcaggca
attcctcttagtgtcgatctttggatacattatataaacttcttaaaggagaccttggac
cctgctgatccagaaactaacagtaccattcggggagcctacgagcacgcagtgttagct
gctgggacagacttccgttcagacagactctgggaaatgtatataaactgggaggacgag
caggggaacctaagggaagttacatccatctatgaccgcatccttggaattccaacgcag
ctctacagccatcacttccagaggtttaaggagcacatccagaacaacttgcctcgtgac
ttcctgaccacggagcagtttgtgcagctgcgccgggagctggcgtccgtcaacggccac
ggcggggaggaggcacagccgggagaggacctgccctgtgggacagaagacatcactgac
cctgccaagctaatcactgagatagagaacatgaggcacagaatcattgagatccatcaa
gagatgtttaaccacaacgagcacgaagtcagtaagaggtggacgtttgaggaagcgatc
aagaggccttactttcacgtaaaacctctggagaaaattcagctgaaaaactggaaagag
tacttagactttgagatagagaatggcactcacgagcgagttgtggtcctctttgaaaga
tgtgtcatttcatgtgccctctatgaggacttctggattaagtatgccaaatacatggag
aatcatagtattgaaggagtgaggcacgtctacagcagggcttgcacgatacaccttcct
aagaaaccaatggtccacatgctgtgggctgcctttgaggagcagcagggcaacattgat
gaagcaagaaggatcttgaaaaactttgaggagtgtattctagggctggcaatgattcgc
ttgagaagagtcagcttagagcgcagacacggcaacatggaagaggcggagcagctgctc
gaagacgccttcaggaacgccaagtcagccactgaagcctccttctatgccatcaaattg
gctcggcacctcttcagagtgcagaaaaacctcccaaaggcaagaaaagtgctgtcagaa
gccatagaaatggacaaagagaacaccaagctgtacctcaacttactggaaatggagtac
agtggagacctcacgcagaacgaagagaacatcttgagttgcttcgataaggccgtccat
ggggcgctctccatgaaaatgaggatcacgttttcacagcgaaaagtggaatttcttgaa
gattttggttcagatgtaaacaagcttctggatgcctatgatgaacaccaggcgcttctg
aaggagcaggattctttaaaaaggagagcagagaatgggtcagaggagccggatgaaaag
aaaatgctgacagatgacccaactttggcatcagcacagatgatggatggtgacatgcag
gtcagccaggcagcctacaactacaacgcctggtaccagtacaactaccagaacgcgtgg
aattacggacagtattaccacccgacctga

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