Merops nubicus (carmine bee-eater): 103782209
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Entry
103782209 CDS
T08417
Symbol
HELZ
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnb03019
]
103782209 (HELZ)
Messenger RNA biogenesis [BR:
mnb03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
103782209 (HELZ)
3'-5' decay
Other 3'-5' decay factors
103782209 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
UvrD-helicase
ResIII
PAM2
PhoH
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
103782209
NCBI-ProteinID:
XP_008948209
LinkDB
All DBs
Position
Unknown
AA seq
1940 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIIEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALANKDTRIVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANTTKQQQSPPKGKVHHHNQNDHF
PPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNMVMSVPLPVPWTGYQGRFAVDPRLITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPVS
IGQQQQLQHPDKEQHEQSRNGKSENTAGPEISKIRTPEKKPLESKQADLEANSQNRSPES
RSTVGYPNAKFHRKENLNPRQLNLHLTPPHSQYAVPSRHFQHLPQIPRQPYPLQQQQNLL
SQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNPIPHRPH
SPAVDAVISEQHPPPMLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGXIGETLDRMHGN
VALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRANWK
LASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRSPPALPS
PSCNSNHSGHFPTFTENSRDIEIPSNPAFQQHLPQIYNPPFSMPSEHITPSPLKYLQPDG
SWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHAVGQEPFHPLASRAVSASS
LHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNYTSP
ELWVNSSSSAPYPNIPCNGANRAVPPRELLAPPKTVKPPEEHLKAENIQLSNSFNYNVLQ
HLGQFPPLMPNKQIVESNSSSQQNAGGSKPVMSYASALRAPPKPKPPPEQTKKNSDPLSL
FQELSLGSSSGSNGFYSYFK
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagacgctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacgcttcttgct
gaaacagaggcagctggtaaagtaccatctggatatcatgtagaagatttagaagaaggg
tctcgggatggttggcagttccgccccccgccccggggagtcaccagcagcgaggaatat
acgctgtgtaaaagattcttagagcaagggatctgcaggtatggtgcacagtgtacttca
gcacattcccaggaggagctgacagagtggcaaaagcgatatgcctcccgcctgatcagg
ttaaaacagcagaaggaaaacaaacagtgctcgggcagttatatggaaaccttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctatcggtaactgtcaccaccaaaaagtctcatcagacatgg
acatttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtatcgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagaaaactgtcaggaatggataggagggaagatggtccagaatgga
atagatcattatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaaccgttgtgtttgactttggattagagccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagaccttgaatacctgatgcatgcacggcaacagctactaact
acagcgaagcgttgggattctacttctaagactattatagaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaatccctctctctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctacat
gacctcctatatattgaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaatggacaactttttggccgctttaagctcactgaaacgctctcagaagatacc
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaagattatatcttcttgagggtatccagggaatgctgcgaagaactaaatctt
cgggcagattgtgagatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgccttggataggattaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctcaatgctaagcagaaagaggctgttctggctatcactactccactttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaaccttcactctggctcaggca
gtcaagcacatactccaacaacaggatactaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagttgtg
catcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaagac
atccttaagcaacgagtagtagttgttactttaaatacatcacagtatctatgtcaactg
gatcttgaaccagggttttttacacacattctcttagacgaagctgcgcaggctatggag
tgtgaaactattatgcctctagcattagctaataaagacacaagaattgtcttggctgga
gaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaaccttcat
gtttcattgcttgatcggctctatgagcactaccctgcagaatttccatgcaggatcttg
ctgtgtgagaactatcgctcccatgaagctatcatcaattatacatctgaacttttctac
gaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttgacg
ttcttcacagcacgtggggaagatgtgcaagaaaaaaatagtacagctttttacaataat
gcagaggtgtttgaagtagtagagcgtgttgaagaattaagaagaaagtggcctgttgcc
tggggcaaattggatgatggcagcataggtgtcgtaacaccttacgctgaccaggtgttc
agaattcgggctgaacttcggaaaaaaagactgtctgatgtcagtgtggagagagtgctg
aatgttcagggaaaacagtttagagttttgtttctcagcacagtacgaacacggcataca
tgtaaacataagcaaacacccattaaaaggaaagagcagttactggaggattccacagaa
gatttggattatggtttcctgtctaattacaaacttctcaacactgccattacaagagca
caatccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgcagg
aaattttgggaaaggtttattgccctgtgtcatgagaatgaaagtctccacggtatcaca
tttgaacagatcaaagctcagctggaagctttggagttaaagaaaacttatgtgttgaac
ccactggctcctgagtttatccctcgagctcttcgacatcagcattcagccaataccacc
aaacagcagcagtctccaccaaagggcaaggtccatcatcataaccagaatgaccatttc
ccacctgatggaattgttcagcccaatccttcagttttaattggaaatcctatccgagca
tatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagtcct
gttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctatgga
ggaaatatggtcatgtctgtgcctttgcctgtgccatggacagggtaccagggtaggttt
gcagttgaccctcgactcatcactcatcaagcagctatggcatataatatgaacctgcta
caggcacatgggcgtgggtctcctataccttatggcctgggacatcattccccagttagc
ataggacaacagcagcagctgcagcatccagacaaggagcaacatgaacaaagtcgaaac
ggcaaaagtgaaaacactgctggacctgaaatcagtaaaattcggacacctgagaaaaag
cctctggaatccaagcaggctgacttagaagcaaattctcagaacagaagcccagagtca
cgttccactgttggttatcctaatgctaaatttcatcgcaaagaaaatcttaaccccagg
cagctgaatctacacctcaccccaccccactcccagtatgctgtccccagtcgccacttc
cagcacctgccacagattccaaggcagccctatcctctgcaacagcagcaaaacctttta
agtcaacaacaaaatcatttacctgaacaacaaaaccaaatgccaccccagcaaagccag
gtagttcagcagcataatcatttgaaccagcagcctccacaaccttcacagctttcacct
gcttaccaggcagggcccagccagtctttttttaataatccaattccccaccgaccacat
tctcctgctgtagatgctgtgatttcagagcaacatcccccacctatgttacaggaagtc
aataatcctttgaggcccattgcccagcacaaccctgttctgccaacccacttgaacaac
ttcattgaagagaatccatcaggannaataggggaaactttagatcgtatgcatggaaat
gtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatggaatgaacat
aatgcctatctcagtcaaggcactattccatatcaacaccatcaccatcctcatctacca
catcttcctcagcaaccaattggattgcatcaacagcagcaagttagggcaaactggaaa
cttgccagtaatacagaagatgaaacagaggcaacatattcaagattccaggatttgctg
agagaactgtcccaccgtgatcaaagtgaaagccgggacttggctgagatgccgccccct
cagtcgaggctgttgcaatacagacaagtccagcccagaagcccaccagcactcccttct
ccttcctgcaactctaaccacagcggtcacttccctaccttcactgaaaacagcagagac
attgaaatacccagtaacccagcatttcagcagcatttaccccaaatatacaatccccct
ttctcaatgccatctgaacatataaccccatctcccttgaaatacctgcaacctgatgga
tcgtggacttatgctaacctacagcagaaccaccttatggggcagggctttcattatggt
atacctccattgccccataggtcccaacaaaacccttttatacaaatacagaatcatcag
catgcagttggtcaggagccatttcatccacttgcatctcgagcagtatctgcttcttcg
ctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaaagaaga
atttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagacagtctt
ggtcagtgtaaagagcttcaggaccacagtaaccagtcatctttcaactatacatcacct
gagttgtgggtaaactcctcctcatctgccccatacccaaacattccatgcaacggagcc
aacagagcagttccaccccgggagttgttagctccaccgaagacggtcaaaccccccgag
gaacacctgaaggccgagaacatccagctctccaactccttcaactacaacgtgctccag
catctcggccagttcccacctctcatgcccaacaagcagatcgtggagtccaacagcagc
agccagcagaatgctggtgggagcaagcctgtcatgtcctacgcaagtgctctgcgggct
ccacccaagcccaaacctcctcctgagcagacaaaaaagaatagtgaccctttgtctttg
tttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctattttaaa
taa
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integrated database retrieval system
