Merops nubicus (carmine bee-eater): 103782477
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Entry
103782477 CDS
T08417
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03030
DNA replication
mnb03420
Nucleotide excision repair
mnb03430
Mismatch repair
mnb03440
Homologous recombination
mnb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103782477 (RPA1)
03420 Nucleotide excision repair
103782477 (RPA1)
03430 Mismatch repair
103782477 (RPA1)
03440 Homologous recombination
103782477 (RPA1)
03460 Fanconi anemia pathway
103782477 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnb03000
]
103782477 (RPA1)
03032 DNA replication proteins [BR:
mnb03032
]
103782477 (RPA1)
03400 DNA repair and recombination proteins [BR:
mnb03400
]
103782477 (RPA1)
Transcription factors [BR:
mnb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103782477 (RPA1)
DNA replication proteins [BR:
mnb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103782477 (RPA1)
DNA repair and recombination proteins [BR:
mnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103782477 (RPA1)
MMR (mismatch excision repair)
103782477 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103782477 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
103782477
NCBI-ProteinID:
XP_008948494
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MQGENVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLSAQ
CICQINRFIVNSLKDGRRVVILMDLNVLKTADQVGGNIGNPVPYNEGLGEIEVCSSAPAP
NPAPSKLQQQNGSLSAAGPAAPKYHAPSNQFGKASAPSSVKTPGGSQAKVVPIASLNPYQ
SKWTICARVTQKGQIRTWSNSRGEGKLFSVELVDESGEIRATAFNDQADKFFPLIELNKV
YYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFVSVSELENTPKD
SIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQP
VVAIKGARVSDFGGRSLSVMSSSTVIINPDSPEAFKLRGWFDSEGQLLEGASISDVRGGP
ASGGNTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENSMYQACPSQDCNKKVIDQQ
NGLYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQDTAEFILGHNAAFLGELKEKN
EQAFEEVFQNANFNTYEFRIRMKLETYNDESRIKATATDVKPVNYREYGKRLIASIRRNA
QLL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggaaaacgtttccaagcccgtgctgcaagtcatcaatacacgggctattgca
acaggaaatgggccaccccgttaccgagtgttgatgagtgatggggtcaacacactgtcc
tcattcatgttggcaacacagctgaactctctggtggaagaggaacgtttatcagcccaa
tgtatctgccagattaacaggttcattgtcaacagcctgaaagatggaaggagggtggtt
atactgatggatttaaatgttctgaaaactgctgaccaggttggagggaatattggcaat
ccagtgccatacaacgaaggccttggtgaaatagaggtatgttcttcagctccagcacca
aacccagcacccagcaaactacagcaacaaaatggcagtttgtcagcagcaggtcctgct
gctccgaagtaccacgctccctcaaaccagtttggtaaagcaagtgctcccagctcagtg
aagacaccagggggatcacaggccaaagtggtgcccatcgccagcttgaacccataccag
tctaagtggaccatttgtgctcgtgtcacccaaaaaggccagatccgcacgtggagcaac
tcccgtggtgaaggaaagctcttttctgtggagctagttgatgaaagtggtgagattaga
gctactgcattcaatgatcaagcagacaagttctttccactcattgaattgaacaaggta
tattatttcaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaat
gactatgagattacattcactaatgagacttcagttgtgccctgtgatgatgcccagcat
cttccatctgttcagtttgagtttgtatccgtctctgaattggagaacacgcccaaagac
tcaattgttgatgtaattggaatttgtaagagctatgaagatgtcactaaaattacagtg
aaagctaacaatagggaggtgtcgaagaggaatgtgcatctgatggatacatcagggaag
ctagtgacagctacgctatggggaaatgaggcagaacagtttgatggttctagacaacct
gtggtagccatcaaaggagcccgagtctctgattttggtggtagaagcctgtctgtcatg
tcctcaagtacagtcatcatcaaccctgacagcccagaggctttcaagctccgaggatgg
tttgactctgaggggcagcttctggaaggtgcctccatctctgatgtgaggggtgggcca
gcatctggaggtaacaccaattggaaaactttgtttgaagccaaatctgagaatttggga
caaggagataaggcagattattttagctgtgtgggcaccatcgtgcatctgcgcaaggag
aactccatgtaccaggcctgtccctcccaggactgcaacaagaaagtgatagaccagcag
aacgggctctaccgctgcgaaaagtgcgatcgggagttccccaacttcaagtaccgcatg
atgctgctggtgaccattgcagactgcttagagtatcagtgggtgacttgtttccaagac
acagcagaattcattcttgggcataatgcagctttcctgggagaactgaaggaaaagaac
gagcaggcctttgaagaagtcttccaaaatgcaaacttcaacacctatgagttcaggatc
cgaatgaagctggagacttacaacgatgaatctcgtattaaggctacagcaacagatgtc
aaacctgtgaactacagagaatatggcaagaggttgattgcaagcatcaggagaaatgct
cagctactgtga
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integrated database retrieval system
