Merops nubicus (carmine bee-eater): 103782547
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Entry
103782547 CDS
T08417
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103782547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnb03041
]
103782547
03009 Ribosome biogenesis [BR:
mnb03009
]
103782547
Enzymes [BR:
mnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103782547
Spliceosome [BR:
mnb03041
]
Complex A
U2 snRNP components
U2 related factors
103782547
Complex B
103782547
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103782547
Ribosome biogenesis [BR:
mnb03009
]
Eukaryotic type
90S particles
Helicases
103782547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
103782547
NCBI-ProteinID:
XP_008948565
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
TLHLNIQVFDFXLCLFVRFRKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRPTS
NSTYYGSAGLQAIKPTMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRH
QSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHA
FKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKAL
VTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
actctgcatttaaatattcaagtatttgattttnttctgtgtctcttcgttcgttttagg
aaagatcgtgaccgggacagggaccgtgatgaccgttctaaagatcgcgacagggatcgt
gacagagatagagatcgtgacagagaaagggacaaggaaaaagatttgcgacctacatct
aactcgacctattatgggtctgctggtttacaagctataaaaccaaccatgattccacac
agtattaaccctttcacaaatctaccacataccccacgatattatgacatcttgaaaaag
aggctacagcttcctgtctgggaatataaagaaagatttacagatattttgattagacat
cagtcatttgtgttggttggagagactggatctggcaaaacaacacagatccctcagtgg
tgtgttgactacatgcgctcattacctggaccaaagaggggagtggcatgtacccagccc
aggagagtagctgcgatgagtgtggcacagcgggttgctgatgagatggatgtcatgctg
ggccaggaggttggttactctattcgatttgaggactgcagtagtgcaaaaaccatcttg
aagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcctctgctggagcgc
tacggtgtcataattcttgatgaggcccatgagagaacactggctactgatattttgatg
ggagttttgaaggaggttgtaagacaaagatctgatctgaaggttatagttatgagcgct
actttagatgctgggaagtttcagatctattttgataactgtcctcttctaacgatcccg
ggtcgtacccatccggtggagatattctatactccagaacctgaaagggactaccttgag
gctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaaggagatctttta
ctctttcttactggacaggaggagatcgatgaagcctgcaagaggataaaacgtgaaatt
gatgacttaggccctgaagttggtgacatcaaaatcattccattgtattccacccttcct
cctcaacaacagcaaaggatttttgaacctcctccacccaaaaagcaaaatggagcaata
ggaagaaaggttgttgtgtccactaatattgctgagacatcattaacaatagatggtgtt
gtgtttgtgattgatcctggctttgcaaaacagaaggtgtacaatcctcgtatcagggtg
gagtctctcttggtgactgccatcagtaaagcttccgctcagcagcgagctggccgtgcc
ggtcgtaccagaccaggcaagtgcttcaggctttatacagagaaggcttacaaaactgaa
atgcaggacaacacataccctgaaattttgaggtctaacttggggtctgtggtgttgcag
ctcaagaagcttggtatagatgatttggtgcactttgatttcatggatcctccagctcct
gaaactctgatgagagccttagagcttttgaattatctggctgctttaaatgatgatgga
gacttgactgagttgggatccatgatggctgaatttccattggacccacaactggctaaa
atggttattgcaagttgtgactacaactgttctaatgaggtcctatctattactgccatg
ttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagcagatgaagcc
aagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtctaccatgct
ttcaaacagaatcatgagtcggttcagtggtgttatgacaacttcattaactacaggtcc
ctgatgtctgcagacaatgtacgccagcagctgtcacgaatcatggatagatttaatttg
cctcgcaggagcacagactttaccagccgagactattacatcaacatcaggaaggcatta
gttactgggtatttcatgcaggtggcacacttggagcgaacggggcattacctaacagta
aaagataaccaggtggtgcagttgcatccctccactgttcttgatcacaagccagaatgg
gtgctctacaatgagtttgtccttacaacgaagaattacatccggacatgtacagacatt
aagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaattttccacag
tgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaaggaatactca
cagtactga
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integrated database retrieval system
