Moraxella nasicaprae: LU297_00600
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Entry
LU297_00600 CDS
T09131
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mnc
Moraxella nasicaprae
Pathway
mnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LU297_00600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnc03400
]
LU297_00600
Enzymes [BR:
mnc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LU297_00600
DNA repair and recombination proteins [BR:
mnc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LU297_00600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
UXZ04988
LinkDB
All DBs
Position
complement(121066..124953)
Genome browser
AA seq
1295 aa
AA seq
DB search
MMDKKTHTPTGIAALDCSLQGGYLIEASAGTGKTWTLTGIILRLLIEKKYSPERIVATTF
TKAAAAEMQERILQRLQNFYALIRWLKSQQSHHQAWFDVKNLAQSLPQIENMASMAGVDG
SDPIHLYLLSFLIQSGEKTLDETIRRTGLLLTTLDKLFVGTLDSLTQKWLKEFSAQIGHH
SDVQISPDATRYTAAMIHDELRAKEVQLKLDNPLLYRLLLQQYPNLFGDVNTMMHRINQV
LQFFSAPIDEVSPADVTLEDIQDILHDVGCVDFDGLQEFYDANHNIFLGISKKTANSLQE
NLPLWQTILDMVNQHGLDFVAHLSKQQHAFLADIKSWSDAEWKNVFNKKHDQSAKDRLIA
LLEEMATLAACPQMLLSVQEHYIRQLSYQIALTIKERLAGVLEAQKQTTFTLQMVRLNTA
LSVNPALAKHIRHHYPVALIDESQDVNGLQVELLEQVYLKDMLNYQLQMKRFDEIGGDQP
KPQKGFLLLVGDPKQAIYRFRGGDVANYNLLKYYGEQQSGQSVLNRSLVLDTNRRSNRAL
IELLNVWFVDNGASGFANHANLGSEIYYRPISAFEETQRLSWQQNEQHDGVDYVGNSPLT
VLHIAYEDKKEKYQLLAQHINAILQGEHYLAGRRVMPSDVAVLSKTNNELSKLQKELKKL
NIPAIDAKDENVFMTQAGKDLYALMLAILQPNRTDYVGRWLVTPMMGLTLTQAMALLGVD
DDEQMSDELPVGLDKLTLITYLKKAHDRWQKNGLAAALNEILLKNLSHEDVLILSVAQLG
ERYLSDLWQLIELIGTQNHLHESRLLAWYEQMMQQKPEELDETHKRAVLPSETGVHLMSI
HKSKGLEFPIVYLLGLNKTPSENNTGFYPYSDEHFHRRISPNAGRGIQASYYADLDSKEG
IDELRRLGYVGLTRASEQVFVVADDAYNKKDIEKKPLNQWLESMQAAYTLPARLSSVNQI
ELATCTRCADVFGQMSGDEQAIKYADWHQLLPQTKFAGVYQTSFTALVAHLNSLDKEQLA
VVADYDELSVLSQADNEALIINPHEIRQSFIKGRFAGDFLHKVLQHAKRSNELSRVIDDF
VKQLGLPSRYASLHAQAYLVGQSQDETEHHRLVAWLSQVMHANFISSGVSLAQIDEQAQR
RELSFVLGMNDDFSVDKLNQAFAKHSDRALSLLDDGGVAYRYLRGEIDLVYEHQGRFYVV
DYKSNHLGVLPSDYHEDSLSKAMDKSGYWLQAAIYQVALHRLLKLKIADYAGQESRYLGS
VEYVFLRGIDPENPQMGRLKWQPPLPLILALDEIL
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaaaaagacacacacaccaacgggcattgcagctttggattgctctttgcaa
ggcgggtatctgattgaggcatcagcaggaacaggtaaaacttggacgctgacaggcatt
attttaagactgctgattgaaaaaaaatattcgcctgaacgcattgtggcaacgacattt
accaaagctgccgccgcagaaatgcaagagagaattttgcaacgactacaaaatttttat
gcgttgattcgttggctaaaatcccagcaaagccatcatcaagcgtggtttgatgttaaa
aatcttgcacagtcattaccgcaaattgaaaacatggcatcaatggcaggtgttgatggt
agtgatccaattcatctttatttattaagttttttgatacaatctggcgaaaagacccta
gatgagaccattcgccgtactgggctattattaaccactttggataagctgtttgtgggg
acgctagatagcctgacccaaaaatggctcaaagaattttccgcccaaatcggtcatcat
agcgatgtgcaaatctcaccagatgccacacgatataccgcagcgatgattcatgacgag
ctgcgagccaaagaagtgcagttaaagctggataatcctttgttgtatcgtttgttgttg
cagcagtatcccaatctgtttggcgatgtcaataccatgatgcatcgcatcaatcaggtg
ctacaatttttttctgcaccgattgatgaggtatcgccagccgatgttactttggaggat
attcaagatattctacatgatgttggttgtgttgattttgatggtttgcaagagttttat
gatgccaatcataacatctttcttggcataagcaaaaaaaccgccaatagcttgcaggaa
aatttgccactttggcagaccatattagacatggttaatcaacatgggcttgattttgtt
gcccatttaagtaagcaacaacacgcatttttggcagacattaagtcatggtctgatgcc
gagtggaaaaatgtgtttaataaaaagcatgaccaatcagccaaagataggttgattgcg
ttgttagaagagatggcgactttggcggcttgcccgcagatgctactatcggtgcaggaa
cattatattcgtcagctgtcttatcagattgccttgaccatcaaagagcgtctggctggt
gtgttagaagcccaaaagcagacaacttttaccttgcaaatggtgcgactaaataccgcc
ttatccgtcaatcctgctttggcaaaacacattcgccatcattatcctgtggcattgatt
gacgaatcccaagatgtgaacggtttgcaagttgagctattggaacaagtatatcttaaa
gatatgcttaattatcaactgcaaatgaaacgctttgatgagattggtggtgaccagcca
aaaccacaaaaaggttttttgcttttggtgggcgaccctaagcaggcgatttatcgtttt
cgtgggggcgatgtcgccaactataatttgctcaaatattatggcgaacaacaaagtggt
caatcggtgctaaatcgttctttggtgctggacaccaaccgccgctccaatcgtgccttg
attgaattattgaatgtatggtttgtggataatggtgcgtcaggatttgccaatcatgcc
aatctaggtagcgagatttattatcgaccaatcagtgcatttgaggaaacccagcgactg
tcttggcaacaaaacgaacaacatgatggcgtggattatgtgggcaacagtccgctgacg
gtgctgcacatcgcctatgaagacaaaaaagagaaatatcaattattggcacaacacatc
aatgccattttgcaaggcgagcattatttggcagggcgacgagtcatgccaagcgatgtg
gcggtactgtccaaaaccaataatgagttatcaaaactacaaaaagaattaaaaaaacta
aacatacctgccattgatgccaaagatgaaaatgtctttatgacgcaggcgggcaaggat
ttatatgcgttaatgttagcgattttgcagccaaaccgcaccgattatgtgggcagatgg
ttggtaacgccaatgatgggtctgacactaacgcaagcgatggcgttgcttggtgtggac
gatgatgagcagatgagtgatgaattgcccgtcggactggataaactaaccctcatcact
tatcttaaaaaagctcatgacagatggcaaaaaaatggcttggcggcagcgttaaatgaa
attttactaaaaaatttatctcatgaagatgtgttgatattatccgtagcacagcttggc
gaacggtatttgagtgatttgtggcagttgattgaattgattggcacacaaaatcatctg
catgaatctcgcctgctggcatggtatgagcaaatgatgcagcaaaaaccagaagagcta
gacgagacacacaaaagagcggtgttgcctagcgaaacaggcgtacatctgatgagtatt
cataaatccaaaggtttggaatttcccatcgtgtatttgcttggtctaaacaaaaccccc
agtgaaaataacacgggtttttacccttatagcgatgaacattttcatcgtcggatttcg
ccaaatgctggtaggggaattcaggcaagttattatgctgatttggacagcaaagagggc
attgatgaattaagacgcttgggctatgtgggattgactcgggcatctgagcaggttttt
gtggttgctgatgatgcgtacaacaaaaaagatattgagaaaaaaccgctcaaccagtgg
ctagaatccatgcaggcagcctacacgctgccagcacgactgtcatcggtcaatcagatt
gagctggcgacctgtacacgatgtgctgatgtctttggtcagatgagtggtgatgaacag
gcaatcaagtacgcagactggcatcagttgttaccacagacaaagtttgcaggcgtatat
cagacgagcttcaccgccttagtagcacatctaaattctttggacaaagaacaattggca
gtggtggcagactatgatgaattatccgtgctaagtcaggcggataatgaggcacttatc
atcaatccgcatgagattcgccaaagtttcatcaaggggcggtttgcaggggattttttg
cacaaggttttgcagcacgccaaacgcagtaatgagcttagtagagtgattgatgatttt
gtcaaacagcttggattgcccagccgttatgccagtctgcacgcccaggcctatctggtg
ggacaatcccaagatgagacagagcatcatcggctggtggcgtggctaagtcaggtgatg
cacgctaacttcatcagttcgggtgtgtcgctggcacagattgatgagcaggcacaaaga
cgagagctgagctttgttttgggcatgaatgatgatttttcggtggataagctaaatcaa
gcctttgctaagcatagcgaccgtgcattgtccttgcttgacgatggcggtgtggcgtat
cgttatctgcgtggtgagattgatttggtgtatgagcatcaaggtaggttttatgtggtg
gattataaatccaatcatcttggtgttttgcccagtgattatcatgaggatagcctgagt
aaggcgatggataagtctggctattggttgcaagccgccatctatcaagtggcattgcac
cgcttgttaaagctcaaaattgctgattatgctgggcaagaatcacgatatttagggtca
gtagagtatgtctttttgcgaggcattgaccctgaaaatcctcaaatggggcggttaaaa
tggcagccgccattaccactgattttggcacttgatgagattttatag
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