Moraxella nasicaprae: LU297_00610
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Entry
LU297_00610 CDS
T09131
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mnc
Moraxella nasicaprae
Pathway
mnc03030
DNA replication
mnc03430
Mismatch repair
mnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LU297_00610 (dnaE)
03430 Mismatch repair
LU297_00610 (dnaE)
03440 Homologous recombination
LU297_00610 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnc03032
]
LU297_00610 (dnaE)
03400 DNA repair and recombination proteins [BR:
mnc03400
]
LU297_00610 (dnaE)
Enzymes [BR:
mnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LU297_00610 (dnaE)
DNA replication proteins [BR:
mnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LU297_00610 (dnaE)
DNA repair and recombination proteins [BR:
mnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LU297_00610 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UXZ04990
LinkDB
All DBs
Position
129427..133134
Genome browser
AA seq
1235 aa
AA seq
DB search
MSFVHLGVRSEYAIVDSIIRIKELVKAAKDDGQTALGLVDWNNMFAAVKFYKACVGAGIK
PILGAEVVIGDAIDRQAEDDKYSIMLYAMNNDGYKNLLRLLSDAYTDRPMGANGTVSIHT
PIITKSALFARSEGLIAILTSRSEIAPTLLGNHPDSALNALQTWQSVFGDRLYLGIKRTK
TGDDRFNVQAIIQGSKLGIAVIAHNDVRFLNATPQADIGGKDVDTSSDFDAHEARVCIAT
GYTLGDPNRPRDYTELQYFKSQTEMAELFADLPQVIENTALLASRCNVTLTLGINVLPDF
PIPEGETIESFFRKTSAEGLNRRLDKLYPPSERGDDWANIRKPYDERLDYELDIIIKMGF
PGYFLIVMDFIRWAKANGVPVGPGRGSGAGSLVAYALNITDLDPLHYDLLFERFLNPERV
SMPDFDIDFCIEGRDRVIDYVARQYGRQAVSQIITFGTMAARAVVRDVTRVQGKPFGLGD
RISKLIPKTPGISLADAIEQEPQLKDLLTNPEASDHELAREIWDMAEKLEGICRNVGKHA
GGVLIAPNRISDFSAVYCDDEGHPVSQFDKDDVEAVGLVKFDFLGLRNLTVIQAAVDNIN
DTRAKLGQEPIDLETLPLDDMAVYESVLQQAKTSAVFQLESSGMKKYLTQLKPTNIEDVI
AMCALYRPGPLESGMVSDFIDRKHGVQEVAYPHAQYQHDSLKPSLESTYGVIVYQEQVMQ
IAQVLAGYTLGGADMLRRAMGKKKPEEMAKQRSTFVEGAVAQNIDGVLAAQIFDLVEKFA
GYGFNKSHSAAYGVLAYQTAYLKHYYPAEFMAAVLTSEMDDTDQVVFLLSDCKDNFNLNV
IPPSINHSQWRFVVRDAKTVVYGLGAVKGVGEEAVASIVKARQSGPFKDLYDFCNRVDIK
KVGKRTLEALIKAGCFDVLAETLKPHYLTDEGDFSYQIRRGLWEQLPDAMAAAEQNRQNQ
LIGTFDLFQEVDDGLSVAPELPEILWSTQDRLRFEKETLGLYLTGHPLDEFRGELANYTT
VASIADLSDTGYNKYSHVAGLIIDVANFGNRVAVTIDDGKGRMELSCFNDTFNQLKHILT
VDKSVPLFNEDGSPMLDKNHKQMTKKTDNIIIAKVSIREDGGRMFARLQHAQTTEQARLH
KLKEVHAKIGANDTHHLDNLLSIIKENDPLATTINTQRHQDGEFYVDDCLPIHLYVYDEC
GLAKVAVNDRLRLYPSDDNIIKLKQWLTADNVVLR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgtacatttgggtgtacgcagtgagtatgccatcgtcgattccatcattcgt
atcaaagagttggtcaaagccgccaaagatgacggacagaccgctcttggcttggtggat
tggaataatatgtttgcggcggtcaaattttataaggcatgtgtcggtgctggcattaag
cccattttgggggcggaggttgtgattggcgatgccatcgaccgtcaagccgaagacgac
aaatacagcatcatgctctacgccatgaataatgatggctataaaaatctactacgacta
ctgtctgatgcttataccgaccgaccaatgggggcgaatggcacggtcagtatccacaca
cccatcatcaccaaatccgctctatttgctcgctccgaaggactgattgccatcttgacc
agtcgctcagaaatcgccccaaccttgcttggtaatcacccagattctgctctaaatgcc
ctacaaacatggcaatcggtatttggcgatcgtctgtacttgggcatcaaacgcaccaaa
acaggcgatgaccgatttaatgttcaggcaatcattcagggttctaaacttgggattgcc
gtcatcgctcacaacgatgtgcgttttttgaacgccacaccgcaagctgatattggcggt
aaagatgtcgataccagtagtgattttgacgctcacgaggctcgtgtgtgcattgccaca
ggttatacattgggcgacccaaaccgaccaagagactacaccgaattacaatattttaaa
agccaaacagagatggcagagttatttgctgacttgccacaagttattgaaaacaccgcc
ctacttgccagtcgctgtaatgttaccttgactttgggcatcaatgtcttgcctgacttt
ccgattccagagggcgaaaccattgaaagcttttttagaaaaacctctgccgaaggtctc
aaccgccgtttggacaaactatatcctcccagcgaacgaggcgatgactgggcaaatatt
cgcaagccctatgacgagcgacttgattatgagctagacatcatcatcaaaatgggcttt
ccaggctattttctcatcgtgatggactttatccgctgggcaaaagccaatggcgtgcct
gtcggtccaggtcgtggctcaggagcaggttctttggtggcttatgcattgaacatcacc
gacctagaccctttgcattatgacttgctgtttgaaagatttttaaacccagagcgtgtc
tcgatgcctgactttgacattgacttttgtatcgagggtcgagaccgtgtgattgactat
gttgctcgccaatatggtcgtcaggcagtcagtcaaatcatcacttttggtacgatggcg
gctcgtgcggtggtgcgagatgtgactcgtgtgcagggcaagccttttggtctgggcgat
agaatctccaaactgattccaaaaacccctggcattagccttgccgatgccatcgaacaa
gaaccgcagcttaaagacttattaaccaatccagaagccagcgaccatgagcttgccaga
gaaatctgggacatggcagaaaaactagaaggcatttgtcgaaatgtcggtaagcatgca
ggtggcgtgctgattgccccaaatcgcatcagtgattttagtgcggtatattgcgatgat
gagggtcaccctgtcagtcagtttgataaagatgatgttgaggcagttggactggttaaa
tttgacttcttggggcttagaaacctcaccgtcattcaggcagcggtcgataacattaac
gacactcgtgccaaacttgggcaagagccgattgaccttgaaaccttgccacttgacgat
atggcggtctatgaatcggtgctacaacaagccaaaaccagtgccgtattccagcttgaa
agctcgggcatgaaaaaatacctaacccagcttaaaccgactaatattgaagatgtcatt
gcgatgtgtgccttgtatcgacctggcccacttgaatcaggcatggtgtcggatttcatt
gaccgcaaacacggcgtacaggaagtggcttatccacacgcccaatatcagcatgacagc
ctaaaaccatcgctagaatccacctacggagtcatcgtttatcaagaacaagtcatgcaa
atcgctcaggtgctggcaggctatacgctgggcggtgctgatatgctgcgtcgtgctatg
ggtaagaaaaaacccgaagaaatggcaaaacaacgcagtacctttgttgagggtgctgtt
gcccaaaatatcgatggtgtgctggcggctcaaatttttgatttggttgaaaaatttgca
ggttatggctttaacaaatcgcactcagcagcctacggtgtgcttgcctatcagaccgcc
tacctaaaacactactaccctgccgaattcatggcagcggtactgacttcggaaatggac
gataccgaccaagtggtgtttttattaagtgactgtaaagataactttaatcttaatgtc
ataccgccaagcatcaatcacagccagtggcgatttgtggtgcgagatgccaagacggtg
gtctatggcttaggagccgtcaaaggcgtgggcgaagaagcggttgccagcattgtcaag
gcacgccaaagtgggccttttaaggatttgtacgacttttgcaaccgtgtggacatcaaa
aaagtaggcaaacgcacgctcgaagccttgattaaagcaggctgttttgatgtcttggca
gaaacactcaaaccacactatctgactgatgagggtgattttagctaccaaatccgtcgt
ggattatgggagcagttgcctgatgccatggcagccgctgaacaaaatcgccaaaatcag
ctcattggtacttttgacttattccaagaagttgatgatggtttgtcggttgccccagaa
ttgcccgaaattttatggagcacccaagaccgcctgcgttttgaaaaagagacgcttgga
ctgtatttgacaggacacccgttggacgaatttcgtggcgagcttgccaattacaccacc
gttgccagcattgctgatttatccgacacaggctataataaatacagtcatgtggcagga
ctaatcatcgatgtcgccaattttggcaaccgtgtggcggtcacgattgatgatggcaaa
ggacgaatggaattaagctgttttaatgatacttttaatcaattaaaacatattttgacc
gttgataaatccgtgccattatttaacgaagatggttcgccaatgcttgacaaaaaccac
aagcaaatgaccaaaaaaaccgacaacatcatcatcgccaaagtcagcattcgtgaagat
ggcggtcgaatgtttgctcgactgcaacacgcccaaaccaccgaacaggcacgcttgcac
aaactcaaagaagtccatgccaagattggggcaaatgacacacatcatttggataactta
ttaagcatcatcaaggaaaatgaccctttggcaaccaccatcaatacccaaaggcatcaa
gatggcgaattttatgtcgatgactgcctgcccattcatctgtatgtctatgatgaatgc
ggcttggcaaaagtcgctgtcaatgaccgactgcgactctaccccagcgatgataatatc
atcaaactcaaacaatggctgactgccgataatgtggtgctacgctaa
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