Moraxella nasicaprae: LU297_01905
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Entry
LU297_01905 CDS
T09131
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mnc
Moraxella nasicaprae
Pathway
mnc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU297_01905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnc03019
]
LU297_01905
03400 DNA repair and recombination proteins [BR:
mnc03400
]
LU297_01905
Enzymes [BR:
mnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LU297_01905
Messenger RNA biogenesis [BR:
mnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LU297_01905
DNA repair and recombination proteins [BR:
mnc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LU297_01905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
HTH_24
HTH_5
MarR_2
AAA_22
HTH_11
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
UXZ05231
LinkDB
All DBs
Position
436362..438440
Genome browser
AA seq
692 aa
AA seq
DB search
MHFNPSRALELLRQGSSNPNAKFRDGQEEAITHLVTSTQRLLVVQKTGWGKSFVYFIATQ
LLRESGAGITLLISPLLALMRNQIAAAKRMGLKAVSINSENTDDWKQIEQEIILGQVDIV
LISPERLANQNFINNVLSQIAGNIGLLVIDEAHCISDWGHDFRPDYRLIERIIKNLPPNL
RVLATTATANQRVMDDLIAILGPNIAVSRGDLNRPSLTLQTIKLPSQIERLAWLAEQLSH
LQGSGIIYTLTVRDANQVADWLKLQGFDVEAYTGESGDKRIELEDKLLNNQVKALVATTA
LGMGYDKPDLGFVIHYQMPNSVVAYYQQVGRAGRALSNAYGVLLSGIEDDEISAFFIDSA
FPKPNEVNQILNALKQSPNGLSSNELQDNINLSQGRISKALKVLSLESPAPLVKQDTKWQ
LTSATLSTDFWQRVNRLTELRKNEHQQMKNYVDLPFGQHMAFLVNALDGDTQQIMPPQLP
PLPTLIHPTFVQQASEFLHRSNVIIEPRKKWATGGSTQFSQKGNINPNFQAEEGRALSIW
GDAGWGKLVKQGKYQDNHFADELVNACCEMIERWQPNPKPTWVTCVPSLRHPDLVPDFAR
RLAMKLGLPFMPIIQKIKETEPQKMMQNSHMQAHNLDGVFQLSDNPLSEPVLLIDDMVDS
RWTLTICSYLLKFNGSGAVFPLVLSQTSNQGE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcactttaatccaagtcgcgctcttgaattattaagacaaggttcaagtaatccaaat
gctaaatttcgtgatggacaagaggaggctattactcatcttgttaccagcacacaaaga
ctgctggtagtgcaaaaaacaggctggggtaaaagttttgtttattttattgccacacaa
ttattacgagaatcaggtgctggcattacgctacttatctcgccattattagcgttaatg
cgtaaccaaattgcggcagcaaaaagaatgggcttaaaggcggtaagtatcaattcggaa
aataccgatgattggaagcaaatagaacaagagattattttaggacaagtggatatcgtt
ctaatctcacctgaacgattggcaaatcagaactttatcaataatgttttgagtcaaatt
gctggaaatattggtttattggttattgatgaagcacactgtatttcagattggggacac
gattttcgtccagattatcgtttaattgaacgaattattaaaaatttaccacccaatctg
cgtgttttggcaactacagcaaccgccaatcagcgtgtaatggatgaccttattgccatt
ctaggacccaatattgcggtttcaagaggagatttaaatcgcccatcattaaccttacaa
acgattaaattgcccagccaaattgaacgtttggcgtggctggctgaacaactgtctcat
ttgcaaggtagcggtattatttatactttaacagtgagagatgccaatcaagttgctgat
tggcttaaattgcaaggttttgatgtggaagcctatacaggcgaaagtggtgataaaagg
attgaattagaagataaactacttaataatcaagtcaaagcattggttgccacaactgct
ttgggaatgggatatgataagcctgatttgggatttgtcattcattatcaaatgccaaat
tctgttgttgcttattatcaacaagttggacgagctgggcgagcattatcgaacgcttat
ggcgttttattgagcggtatagaagatgatgaaatcagtgcgttttttattgacagtgct
ttcccaaaaccaaatgaagtgaatcaaattttaaatgcattaaaacaatcgccaaatgga
ttatcatcaaatgaattgcaagacaacatcaatttaagtcaaggcagaatcagcaaagca
ttaaaagtcttatcattagaatcgccagcacctttggttaagcaagacacaaaatggcaa
ttaacttccgctacattatctactgatttttggcaaagggttaatcgcctcacagaatta
agaaaaaatgaacatcagcaaatgaaaaattatgttgatttaccatttggtcagcatatg
gcatttttagttaatgcacttgatggtgatacacaacaaattatgccaccccaattacca
ccattaccaactttaattcacccaactttcgttcaacaagccagtgaatttttgcacaga
agtaatgtgattattgaaccaagaaagaaatgggcaacaggtggttcaacacaattttcg
caaaaaggtaatatcaatccaaattttcaagcagaggaaggacgtgcattatccatttgg
ggcgatgctggctggggcaaattggtcaaacaaggaaagtatcaagataatcattttgca
gatgaattggtgaatgcctgttgtgaaatgattgagcgttggcaacccaatccaaaacca
acttgggtaacttgcgtgccgtctttgcgacaccctgatttggtgcctgattttgctagg
cggttggcaatgaaattggggttgccatttatgccaattatccaaaaaatcaaagaaact
gagccacaaaaaatgatgcaaaatagccatatgcaagcccataatttagatggcgtattt
cagttgagtgataatccattgtcagaacccgttttattgattgatgatatggtggattct
cgttggactttaaccatatgtagctatcttttaaaatttaatggtagtggtgcagtcttt
ccacttgtactttctcaaaccagcaatcaaggtgaataa
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