KEGG   Moraxella nasicaprae: LU297_02605
Entry
LU297_02605       CDS       T09131                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
mnc  Moraxella nasicaprae
Brite
KEGG Orthology (KO) [BR:mnc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mnc03032]
    LU297_02605
   03029 Mitochondrial biogenesis [BR:mnc03029]
    LU297_02605
Enzymes [BR:mnc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     LU297_02605
DNA replication proteins [BR:mnc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    LU297_02605
Mitochondrial biogenesis [BR:mnc03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    LU297_02605
SSDB
Motif
Pfam: PIF1 HTH_40 AAA_19 AAA_30 Pif1_2B_dom AAA_22 SH3_13 Herpes_Helicase DEAD AAA_16 AAA_7 NTPase_1 Viral_helicase1 nSTAND3 IstB_IS21 SLFN-g3_helicase Sigma54_activ_2 TsaE UvrD_C_2 T2SSE AAA_24 AAA_5 KAP_NTPase NAT10_TcmA_helicase PhoH Zeta_toxin ABC_tran AAA_14 GerE
Other DBs
NCBI-ProteinID: UXZ05357
UniProt: A0ABY6F5X9
LinkDB
Position
complement(562591..564408)
AA seq 605 aa
MKQSTALAILKTGQNVFLTGQAGAGKTYVLNQYINYLKARQVPIAITASTGIAATHMGGV
TIHSWSGIGIQNDIEKINLSRLKEKDGFVDKLKNTRVLIVDEISMLHLKQVDTIDAVLRH
FIDPNLPFGGLQVVFSGDFFQLPPVGEKGETSKEKYAFMSKAWIDCNFQICYLSEQHRQD
DSRANQDELSLTDILNQIRSQTVSWAAIDRLKATQNNQVQAHRTRLYTHNIDVDRINDDE
LVTLSGKSVCFKAVVSGDKALIEMLLKGVRAPQELTLKVGAKVMFVKNMPNLGVYNGTMG
VVAYFVGAGGQKYDGSSDIPASAYPVVRLNNGGEVNATPEDWTIEDADGGVLASLSQVPL
CLAWAITIHKSQGMTLDAAEIDLSKTFEMGQGYVALSRLKSLDGLKLLGLNTKSLLLDEW
VQRVDRRLLELSDEQEQQFLALDDKTVTDIHQAFIKVCGGLDDVKKISLNEQIIVKQTHQ
KRQQEQQHHDGFHDGVRETLSLVKEGLSISQIAQKRAYAESTIIGHLDKIVAKMPQLDYS
AIRPEQSIVDAVKEAFEKLDAQGEFIEGIRLRPIFEELREVYSYNQIRLALVFIDKSSQQ
ADKEG
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgaaacaatcaaccgcattggcaatcctaaaaacagggcagaatgtttttttgacaggg
caggcaggggcaggcaaaacctatgtgctaaatcagtacatcaattatctaaaagcacgc
caagttccgattgccattactgccagcacaggcattgctgctacacacatgggcggtgta
acgattcattcgtggtcaggcatcggtattcaaaatgacattgaaaaaatcaatttatca
agactaaaagagaaagatggttttgttgataaactcaaaaataccagagtgctgattgtc
gatgaaatctcaatgcttcatctcaaacaagttgataccatcgatgcggttttgcgacat
tttattgacccaaacttaccatttggtggtttgcaagtggtgttttctggtgactttttt
cagttgccacctgtgggcgaaaaaggcgagacttccaaagaaaaatacgcttttatgtct
aaggcgtggattgactgcaattttcaaatttgttatttgagcgagcaacatcgccaagat
gacagccgtgccaatcaagatgagctaagcctgactgatattctaaatcagattcgtagt
cagacggtcagctgggcagcgattgataggcttaaagccacacaaaataaccaagtgcag
gcacatcgcaccagattgtacacgcataacatcgatgtggatcgcatcaatgatgatgag
ctggttactttgtcgggcaaaagcgtgtgctttaaagcggtggtgtctggcgacaaagcc
ttgatagaaatgcttttaaaaggcgtgcgagcaccgcaagagctgactctaaaagtcggt
gccaaagtcatgtttgtcaaaaatatgccaaacttgggtgtttataatggcacgatgggc
gtggtggcgtattttgttggggctggcggtcaaaaatatgatggcagtagtgacattcct
gcctctgcctatcctgtggtacgcctcaataatggtggtgaggtcaatgcaacgccagaa
gactggaccatcgaggacgctgacggtggtgttttggcaagtttaagccaagtgccactt
tgtttggcgtgggcaatcaccattcataaatcacagggcatgaccttagacgctgctgaa
attgatttatccaaaacctttgaaatggggcaaggctatgtggcattgtctcgtctaaaa
tcattggacggtctaaaactgctgggattaaataccaaaagtttattgttagatgagtgg
gtgcaaagggtggataggcgactgcttgaactttctgatgaacaagaacagcagtttttg
gcattggacgacaagacagtgacggacattcatcaagccttcattaaagtctgcggtggt
cttgatgatgtcaagaaaatctctttaaatgaacaaatcatcgtcaagcaaacacatcaa
aaacgacagcaagaacaacaacatcacgatggatttcatgatggcgtgcgtgaaacttta
tccttggtcaaagagggtcttagcatcagtcaaatcgcacaaaaaagagcctatgctgaa
tctaccatcatcggacatctagataagattgttgccaagatgccacagcttgattattca
gcaatacgcccagagcagagcatcgttgatgcggtgaaagaggcgtttgaaaaacttgac
gcacaaggcgagttcatcgaaggaatcaggctaagaccgatatttgaagagctgcgtgaa
gtgtatagctacaatcaaatcaggctggcgttggtgttcattgataaatccagccaacaa
gccgataaggagggctaa

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