Moraxella nasicaprae: LU297_09235
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Entry
LU297_09235 CDS
T09131
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
mnc
Moraxella nasicaprae
Pathway
mnc03030
DNA replication
mnc03430
Mismatch repair
mnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LU297_09235 (dnaQ)
03430 Mismatch repair
LU297_09235 (dnaQ)
03440 Homologous recombination
LU297_09235 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnc03032
]
LU297_09235 (dnaQ)
03400 DNA repair and recombination proteins [BR:
mnc03400
]
LU297_09235 (dnaQ)
Enzymes [BR:
mnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LU297_09235 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
LU297_09235 (dnaQ)
DNA replication proteins [BR:
mnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LU297_09235 (dnaQ)
RNase H
LU297_09235 (dnaQ)
DNA repair and recombination proteins [BR:
mnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LU297_09235 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UXZ04730
UniProt:
A0ABY6F4A7
LinkDB
All DBs
Position
complement(1950986..1952272)
Genome browser
AA seq
428 aa
AA seq
DB search
MIIAYTDGACKGNGKELAAGGFGTHITYPNGDILNIWGGEPDTTNNRMELMGAITALERT
PADTPIQIWTDSSYVQKGISEWIHGWKARGWKKSDGKAVLNQDLWQRLDTLSQNRRIDWQ
WVKGHAGHAGNEMADKLANLGVDGAGETFIPALTDQDATPNSSTDISVHTTPSSEHCEQN
PAYDGDTSRINPDFWALLPKPDNRGKPERQLIMDTETTGFEDQGGDRIVEVGIIEMVGRK
FTGKKLHVYINPDREMDEEVIRVHGISNEFLTDKPKFAEVAQDIYEFMVDSEVIAHNANF
DMRFLKMEFDKVGLTDFLDRVQVTDSLAMARQMYPGQKNTLDALVNRLGVGNKNRTFHGA
LLDSEILAEVFLAMTGGQLALSMDEEVKNSEQNEQGVAFSDLSQYASLIQQSGADFDADR
IWRESVLS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgattattgcatacaccgatggtgcttgtaagggcaatggcaaagagttggcggctggc
ggatttggtacgcacatcacctacccaaatggcgacatactcaacatctggggtggcgag
cctgacaccaccaacaatcgaatggaactcatgggagcaatcaccgccctagaacgcacg
cctgccgatacaccgattcaaatctggacggattctagctatgttcaaaaaggcatcagt
gaatggatacacggctggaaagctcgtggctggaaaaaatcagacggtaaggcggtactt
aatcaagatttatggcaacgcttagatacccttagtcaaaatcgccgtattgattggcag
tgggtcaaaggtcatgcagggcacgcaggtaacgaaatggcggataaacttgccaatctg
ggtgtcgatggtgctggcgaaacattcattcccgccttaaccgaccaagacgccacgcca
aattcatcaacagacatcagtgtgcataccacgccatcgtcagagcattgcgaacaaaac
cctgcctatgatggcgataccagtcgtatcaatcctgatttttgggcgttattacccaag
cctgacaatcgtggcaagcccgaacgccaactcatcatggatacagagaccacaggtttt
gaagaccaaggcggtgatcgtatcgttgaggtgggtatcattgagatggttggtcgcaaa
tttactggcaaaaaactgcatgtctatatcaatcccgaccgagagatggacgaggaagtc
atcagagttcatggcattagcaatgaatttttgaccgacaaaccaaaatttgccgaagtc
gcccaagacatttatgaatttatggtggacagcgaagtcatcgcacacaacgccaacttt
gatatgcgatttttaaaaatggaatttgacaaagttggactgaccgactttttggataga
gttcaagtgaccgacagtctggcaatggcaaggcaaatgtatcctggtcaaaaaaataca
cttgacgccctagtcaatcgcttgggtgtaggcaataaaaaccgtactttccacggggca
ttactggactctgagattttggcggaagtttttttggcgatgacaggcggtcagcttgct
ttgtcaatggacgaagaagtcaaaaatagtgaacaaaatgaacaaggggttgcgtttagc
gatttatcacaatatgccagcctaattcagcagtctggtgctgattttgacgctgaccgc
atttggcgagagtctgtcttatcgtga
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