Candidatus Minimicrobia naudis: KOY48_00550
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Entry
KOY48_00550 CDS
T07771
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mnd
Candidatus Minimicrobia naudis
Pathway
mnd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KOY48_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnd03019
]
KOY48_00550
Messenger RNA biogenesis [BR:
mnd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KOY48_00550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
QWQ32379
UniProt:
A0A8F1MC66
LinkDB
All DBs
Position
67976..70135
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AA seq
719 aa
AA seq
DB search
MGQRRLATPQKDDAKKRPQSKKSNNAVLNSTTTRKGEVFRAQRRTSENVNLRASQHLIDI
PVNKSVYNGYGGEQFSAKMQPKPVRGGQPKLRIIPIGGVGEMGIGKNMNAIEYDDEIIIV
DMGFLFPGSDYPGINYITPDITWLEENKHKIKAHVFTHGHLDHIGSFRHFIHRIPAPVYG
SKFTIGMLDRTMDDSEVDFKPDYRVMDPLSHEIVQVSKHFSIELVRVNHSIPDSTAVIIR
TPMGVIVDSGDWRFEESPVDGQKFDLERLTEVASKEGILMFMNESTNCESAGTHTHTEFD
IQYSIGQVMDKFSNSRVILSCFSSQVHRLQLILEEAHKHGRKVAFAGFSMIQNLEVALRS
GTIKIPKDTIMKMEDIVKLPDNQIAVVCTGSQGEFNAVLNRMATGAHKYMKIKGSDVVVF
SSNPIPGNEKSVVRTVDGLMREGSDVIQNGKTHLTGVGPLHLSGHGYYDDHVKLINALNP
TYYMPIHGEFHMLVHNARLAEKECGIPRKNIFVCDAGDIIEIDIERQAKKAGRIQVGGVM
YDDTGAIVSEVVLKDRIHMSQEGMFVVVLTVQRGTGRLLTSPDIISRGFIYLRDSEELMN
MIRQYLKQKAARSFSGKYDLDVVKKEIKDEITHILYDQTRRTPIVIPVINEVGGLKSVKS
EATPAHSVSKSPARGKRPASGEPKMTLPTAPRRRFPQRQVPDTEANDTKARERQNTRPY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagcggcgactagcaacaccgcaaaaagacgacgctaaaaagcgtccgcagtca
aagaaaagcaacaatgcagtattgaatagcacaactactcgcaagggtgaggtttttaga
gcgcagcgacgaacaagcgagaatgttaatctcagggcttcacagcacttgattgatatt
ccggtaaacaagtcggtttacaacggatatggcggcgagcaatttagcgccaaaatgcaa
ccaaaacctgttcgcggcggccagccgaaacttcggattattccaatcggtggtgtgggc
gaaatgggaattggtaagaacatgaacgccatcgaatatgatgatgagattatcatcgta
gatatgggctttctgttcccaggcagcgattatccaggcatcaattacatcacgccagat
atcacttggctggaagagaataagcataaaattaaggcgcacgtatttacgcacggacac
cttgatcacattggttcgttccgtcactttattcatcgtattccagcgccagtttatggc
tctaagtttacgattggtatgcttgatcgaacgatggacgattcagaagtggattttaag
ccagattatcgagtgatggatccgctgagtcacgaaattgttcaagtttctaagcatttt
tcaatcgagttggtgcgagttaaccactcaattcctgattctacggcggtgattattcga
actccaatgggtgtgattgtcgattctggtgactggcgatttgaggaaagtccagttgac
ggtcagaagtttgaccttgagcgacttacggaagtggcttcaaaagaaggcattttgatg
tttatgaatgaatcgaccaactgtgaatcggctggtacgcacacgcacacggagtttgat
attcagtattccatcggtcaggtgatggacaagtttagtaatagtcgagtaattttaagc
tgtttctcgtcgcaggtgcatcgcttgcaattaattttggaagaagcgcataagcacgga
cgcaaggtggcgtttgctggattctcgatgattcaaaacctggaggtggcgttgcgttcg
gggacgattaagattcctaaagacaccatcatgaagatggaagatattgttaaattgcca
gataatcaaattgccgtagtttgtactggctcgcagggtgaatttaacgccgtcttaaat
cgcatggcgacgggcgctcataaatatatgaagattaagggctcggacgttgtggtgttt
agctcaaatccaattcctggcaatgaaaaaagcgtggtgcgaacggttgacggtctgatg
cgtgagggttctgatgttattcagaacggtaaaacacacttgacgggggttggtccgcta
cacttgtcgggtcatggatactatgacgatcatgttaaattgattaacgccctgaaccca
acttactatatgccaattcacggtgaattccatatgttggtgcataatgcccggttggca
gaaaaagaatgtggaattcctcgcaagaatatttttgtgtgtgatgctggagatattatt
gaaattgatattgaaaggcaagcaaagaaggctgggcgaattcaggttggcggcgtgatg
tatgatgacactggcgcgattgtttctgaggttgtgctgaaagaccgcattcacatgtca
caagagggaatgtttgttgtggtgctgaccgtacagcgtggcacgggacgattattgact
agcccagacattatttctcgcggatttatttacttgcgcgactctgaagaattgatgaat
atgattcgccaatacttgaagcaaaaagcggcgcgtagtttttctggcaaatatgatttg
gatgtggtcaaaaaagaaattaaagatgagattacgcacatattgtacgatcagactcgc
cgaacaccaattgttattccggtgattaacgaagttggtggcttgaagtctgtaaagtcg
gaagctacgccagctcattctgtttcaaaatcgccagcgcgcggtaagagacccgcctcg
ggcgagccaaagatgactcttccaactgcgccacgtcgtcgttttcctcaacgccaagta
ccagatacggaagcaaatgacacaaaagccagagagcgacagaatactcgcccgtactag
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