Mycolicibacterium neoaurum VKM Ac-1815D: D174_08210
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Entry
D174_08210 CDS
T02959
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mne
Mycolicibacterium neoaurum VKM Ac-1815D
Brite
KEGG Orthology (KO) [BR:
mne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mne03021
]
D174_08210
Transcription machinery [BR:
mne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D174_08210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
Sigma70_ECF
MarR
HTH_3
HTH_24
DUF7343
KORA
HTH_IclR
HTH_10
DUF134
GerE
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AHC24571
UniProt:
V5XA98
LinkDB
All DBs
Position
1700273..1701025
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AA seq
250 aa
AA seq
DB search
MNSEYADVIEMFRVLGELRDGSAEYERQRERIVTRCLPLADHIARRFEGRGEARDDLVQV
ARVGLVNAVNRFDVEAGSDFASYAVPTIMGEVRRHFRDNGWSVKVPRRLKELHLRLGAAT
AEMSQRLGRAPTPSELAAELDMDREEVVEGLIAGSSYNTLSIDSGGSGDDEAPAIADTLG
SPDDALDQIENREALRPLLSKLPERERTVLVLRFFESMTQSQIAERVGISQMHVSRLLAR
SLAKLRDELQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgaactccgaatacgccgacgtcatcgagatgtttcgcgtactcggcgaactgcgcgat
gggtcggcagagtacgagcggcagcgcgaacgcatcgtcacccgctgcctgccactggca
gatcacatcgcccgacggttcgagggtcgcggcgaggcgcgcgacgacctggtccaggtc
gccagggtgggcctcgtcaatgccgtgaaccggttcgacgtcgaggccggttcggacttc
gcgtcgtatgcggtgccgacgatcatgggcgaggtacgcaggcacttccgggacaacggt
tggtcggtcaaggtgccgcgccggctcaaggaactgcatctgcgtctcggcgccgcgacg
gctgagatgtcgcagcgccttggccgggcacccacaccgtcggagttggctgccgagctg
gacatggaccgcgaagaggtggtcgaaggcctgatcgcgggcagctcgtacaacacgctg
tccatcgacagcgggggttccggtgacgacgaggcgccggctatcgccgatactctcggc
tcaccggacgatgcgctggatcagatcgagaaccgcgaggcgctgcggccgttgctgtcc
aaactgcccgaacgtgagcgcaccgttctggtcctgcgcttcttcgagtccatgacgcag
tcccagatcgccgaacgcgtcggcatctcgcagatgcatgtgtcgcggctgctggcccgc
tcactggccaaactgcgggacgagctgcagtag
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