Mycolicibacterium neoaurum VKM Ac-1815D: D174_10925
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Entry
D174_10925 CDS
T02959
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mne
Mycolicibacterium neoaurum VKM Ac-1815D
Pathway
mne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D174_10925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mne03400
]
D174_10925
Enzymes [BR:
mne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D174_10925
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D174_10925
DNA repair and recombination proteins [BR:
mne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D174_10925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
DUF6215
Motif
Other DBs
NCBI-ProteinID:
AHC25062
UniProt:
V5XAQ2
LinkDB
All DBs
Position
2292066..2292935
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVEVVRRGLDAHVLGRTIADVQVLHPRAARRHLAGSLDLTARLRGTQITGTGRRG
KYLWLTVSSGEAIVVHLGMSGQMLIGAVPNPTHLRIATTFADGSSMNFVDQRTFGGWMLA
DLVTIDGSEIPEPVAHIARDPLDPAFDRDGVVTVLRRKHSEIKRQLLDQTVVSGIGNIYA
DEALWRAKVNGARLSSALTRRQLAEILDAATEVMTGALGQGGTSFDSLYVNVNGESGYFD
RSLEAYGRVDEPCRRCGAPMQRDKFMNRSSFYCPKCQPRPRVRRTASAG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaacttcctgaggtcgaggtggtgcggcgcggacttgacgcgcacgtgctgggc
cggaccatcgccgacgttcaggtgctgcacccgcgtgccgcccgacggcatcttgccggg
tctctcgacctgaccgcgcggctgcgcggcacgcagatcaccggaaccggacgccggggc
aagtacctgtggttgacggtgagcagtggtgaggccatcgtcgtgcacctggggatgagc
gggcagatgctgatcggtgcggtgcccaaccccacccacctgcgcatcgccaccacattc
gccgatggcagctcgatgaacttcgtcgaccagcgcaccttcggtggctggatgctggcc
gacctggtgaccatcgacggtagcgagatccccgaacccgtcgcgcacatcgccagggat
ccgctggacccggccttcgaccgcgatggcgtcgtgacggtgttgcggcgcaagcattcc
gagatcaagcgccagctgctcgaccagacggtggtgtccgggatcggcaacatctacgcc
gatgaggcgctgtggcgggccaaggtcaacggcgcccggttgtcctcggcgctgacgcgc
cggcagctcgccgagatcctggatgcggccaccgaggtgatgaccggagccctcggccag
ggcggcacgtcgttcgattcgttgtatgtcaacgtcaacggtgaatccgggtacttcgac
cgatcactggaggcctacggtcgggtagacgaaccgtgccggcgctgcggtgcgccgatg
cagcgggacaagttcatgaaccgctcgtcgttctattgcccgaaatgccaaccgcggccg
cgggtccggcgtaccgctagcgctggttga
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