Mycolicibacterium neoaurum VKM Ac-1815D: D174_13670
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Entry
D174_13670 CDS
T02959
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mne
Mycolicibacterium neoaurum VKM Ac-1815D
Pathway
mne03030
DNA replication
mne03430
Mismatch repair
mne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D174_13670
03430 Mismatch repair
D174_13670
03440 Homologous recombination
D174_13670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mne03032
]
D174_13670
03400 DNA repair and recombination proteins [BR:
mne03400
]
D174_13670
Enzymes [BR:
mne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D174_13670
DNA replication proteins [BR:
mne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D174_13670
DNA repair and recombination proteins [BR:
mne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D174_13670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AHC25564
UniProt:
V5XDV1
LinkDB
All DBs
Position
2877701..2881243
Genome browser
AA seq
1180 aa
AA seq
DB search
MGSSFVHLHNHTEYSMLDGAAKVKPMIAEAQRLEMPAIGMTDHGNMFGASEFYNVATDAG
IKPIIGIEAYIAPASRFDTKRVQWGDRSQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASFEGQLGKWSRMDAELIAEHAEGIIATTGCPSGEVQTRLRLGHVDEALEAAAKWQDI
FGKENFFLELMDHGIEIERRVRDGLLEVGRKLGIPPLATNDCHYVTREASQTHEALLCVQ
TGKTLSDPTRFKFDGDGYYLKSAADMRALWDPQVPGACDSTLLIGERVQSYADVWTPRDR
MPVFPVPDGHDQQSWLTHEVMTGLAERRFPGAQVPQEYIDRADYEIKVICDKGFPAYFLI
VADLINYARSVNIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDID
IDFDDRRRGEMVRYASEKWGSDRVAQVITFGTIKTKAALKDSARVNYGQPGFAIADRITK
ALPPPIMAKDIPLSGITDPKHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVH
ACAVIMSSEPLVDAIPLWKRPQDGAIITGWDYPSCESIGLLKMDFLGLRNLTVIGDALEN
IKANRGIDLDMDHLPLDDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVL
ALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQEQIMFIAQK
VASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEAAVKALWDTILPFAGYAF
NKSHAAGYGLVSFWTAYLKANYQAEYMAGLLTSVGDDKDKAAIYLSDCRRLGITVLPPDV
NESVHNFASVGDDIRYGLGGVRNVGANVVQSIINGRNEKGKYTDFSDYLNKIDITACNKK
VTESLIKAGAFDSLGHPRKGLFLVHADAVDSVLGTKKAEAIGQFDLFGGGDADTGMESVF
TIPVPEGEWEDKHKLALEREMLGLYVSGHPLDGVAHLLAAHVDTQIPSILEGDIANDTQV
RIGGILASVNRRVNKNGLPWASAQVEDLTGGIEVLFFPQTYSAFGADIADDAVVIVGAKV
AIRDDRISLIANDLVVPDFSNAQGDRPVAVSLPTRQCTVDKVTALKQVLARHPGTSQVHL
RLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcgttcgtgcatctgcataaccacaccgaatactcgatgctcgacggcgcg
gccaaggtcaagccgatgatcgccgaggcgcaacgcctcgagatgccggccatcggaatg
accgaccacggcaacatgttcggggccagcgagttctacaacgtcgccaccgatgccggg
atcaagccgatcatcggtatcgaggcctacatcgcccccgcttctcgattcgataccaag
cgcgtgcagtggggtgatcgcagccagaagggtgacgacgtctccggtagtggtgcctac
acccacatgacgatggtcgccgagaatgcgaccggtctgcgcaacctgttcaagctgtcc
tcgctggcctcgttcgagggccagctgggcaagtggtcgcggatggacgccgagctgatc
gccgagcacgccgagggcatcatcgccacgaccgggtgcccctccggtgaggtgcagacc
cggttgcggctcgggcacgtcgacgaggcgctggaagccgccgccaaatggcaggacatc
ttcggtaaggagaatttcttcctggagctgatggaccacggcatcgagatcgagcgccgg
gtccgcgacgggctgctcgaggtgggccgcaagctcggcatcccgccgttggccaccaac
gactgccactacgtcacccgcgaggcctcgcaaacccacgaggcgctgctgtgcgtgcag
accggcaagacgctgtcggatcccacccggttcaagttcgacggtgacggctactacctg
aagtcggccgcggacatgcgggcgctgtgggatccgcaggtgcccggtgcctgcgattcg
accctgctgatcggcgagcgcgtgcagtcctacgccgatgtgtggaccccccgtgaccgg
atgccggtcttcccggttcccgacggccacgatcagcagtcctggctgacccacgaggtg
atgaccgggctggcggagcgacggttcccgggtgcgcaggttccccaggagtacatcgac
cgcgccgactacgagatcaaggtcatctgtgacaagggcttcccggcgtacttcctgatc
gtcgccgacctgatcaactacgcccgctcggtcaacatccgggtcgggcccggccgtggg
tcggcggccggttcgctggtggcctacgccatgggcatcacgaacatcgacccgatcccg
cacggcctgctcttcgagcggttcctcaaccccgagcgtccgtcggcacccgatatcgat
atcgacttcgacgaccgccgccgcggtgagatggtgcgctacgccagcgaaaagtggggt
agcgaccgggtcgcgcaggtcatcaccttcggcaccatcaagaccaaggccgcgctgaag
gactcggctcgggtcaactacggccagcccggtttcgccatcgccgaccgcatcaccaag
gcgctgccgccgccgatcatggccaaggacatcccgctgtcgggtatcaccgaccccaag
cacgagcggtacaaggaggccgccgaggtacgggggctcatcgacaccgatcccgatgtg
cgcaccatctacgagaccgcccgcggcctggagggtctggtccgcaacgccggcgtgcac
gcctgcgcggtgatcatgagctccgaacccctcgtcgacgcgatcccgctgtggaagcgc
ccgcaggacggcgccatcatcaccggctgggattacccctcgtgtgagtccatcggcctg
ctgaagatggacttcctcggtctgcgcaacctcaccgtcatcggtgacgcgctggagaac
atcaaggccaaccgcggtatcgatctggacatggatcatctcccgctcgatgatccggcg
acctatgagctgctgtcccgcggtgacaccctcggggtgttccagctcgacggcgggccg
atgcgtgacctgctgcgccgtatgcagccgaccggattcaacgacatcgtggccgtgctg
gcgctgtaccggccgggcccgatgggcatgaacgcgcacaacgactacgccgaccggaag
aacggtcgccagccgatcaagccgatccatccagagctcgaagagccgctcaaggagatc
ctggccgagacctatggcctgatcgtctaccaagagcagatcatgttcatcgcccagaag
gtcgcgtcctacaccatgggcaaggccgatgcgctgcgaaaagccatgggcaagaagaag
ctcgaggtgctcgaggccgagtacaagggcttcaaggagggcatgacggccaacgggttc
tccgaggccgcggtgaaggcgctgtgggacaccatcctgccgttcgccgggtacgcgttc
aacaagtcgcacgccgccggttacgggctggtgtcgttctggactgcctatctcaaggcc
aactaccaggccgagtacatggcaggtctgctgacctcggtcggtgacgacaaggacaag
gccgccatctacctgtcggactgccgccggctcggcatcaccgtgctgccgcccgacgtc
aacgaatccgtgcacaacttcgcctcggtcggcgacgatatccgctacggcctcggcggg
gtgcgcaatgtcggcgccaacgtggtccagtcgatcatcaacggccgcaatgaaaaaggg
aagtacaccgacttctcggattatctgaacaagatcgacataacggcatgcaacaagaag
gtgaccgagtccctgatcaaggcgggcgccttcgactcgctggggcatccccgcaagggc
ctgttcctggtgcacgccgatgcggtggattcggtgctcggtaccaagaaggccgaggcc
atcggccagttcgatctgttcggcggcggggacgccgacaccgggatggagtcggtgttc
accatcccggtgcccgagggtgagtgggaggacaagcacaagctggcattggaacgagag
atgttgggtctctacgtgtccggccatcccctcgacggtgtcgcccacctgctcgccgcg
catgtcgacacccagatcccgtcgatcctggaaggcgatatcgccaacgacacccaggtg
cgcatcggcggaatcctcgcctcggtgaaccgccgggtcaacaagaacggtctgccgtgg
gcctcggcgcaggtggaggacctgaccggcggtatcgaggtgctgttcttcccgcagacc
tattcggcgttcggtgccgatatcgccgatgacgcggtggtcatcgtcggtgcgaaggtg
gccatccgtgacgaccggatctcgctgatcgccaacgaccttgtggtgccggacttctcg
aatgcccagggtgaccggccggttgcggtgagcctgccgacgcggcagtgcacggtggac
aaggtgaccgcgctcaagcaggtgctcgcgcggcaccccggcacctcgcaggtgcatctg
cggcttatcagcggtgaacggatcaccaccctggagctcgaccagtcgctgcgggtcacc
ccgtcctcggcgttgatgggtgatctgaaggcgctgctcggccccggttgtctgggcggc
tga
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