Mycolicibacterium neoaurum VKM Ac-1815D: D174_22580
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Entry
D174_22580 CDS
T02959
Name
(GenBank) DNA lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mne
Mycolicibacterium neoaurum VKM Ac-1815D
Pathway
mne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D174_22580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mne03400
]
D174_22580
Enzymes [BR:
mne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D174_22580
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D174_22580
DNA repair and recombination proteins [BR:
mne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D174_22580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_TFIIB
DUF7577
Motif
Other DBs
NCBI-ProteinID:
AHC27159
UniProt:
V5XIC1
LinkDB
All DBs
Position
complement(4749641..4750510)
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AA seq
289 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGRQIVRVDISALSVLKTFDPPVTALYGRPVTGAQRWGKYLG
LQVGEMYLITHLSRAGWLRWSDKLAPAPLKPGKGPIALRVHLVGDEPGQTVGFDLTEAGT
QKRLAVWVVRDPMDVPQIAALGPDALTLGPEDLKEVLAAHGGRIKTVITDQKIIAGIGNA
YSDEILHVAKLSPFATANKLSEVQLVDLHDAMSSVLTDAVARSVGQQAATLKGEKRSGLR
VHARTGLPCPVCGDTVAEVSFVDKSFQYCPTCQTGGKKLADRRMSRLLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttcccgaggtcgaggcgctcgccgaccatctgcgccgccacgccgtcggc
cgccagatcgtgcgggtggacatctccgcgttgtcggttctgaagaccttcgatccgccc
gtgaccgcgctgtacgggcggccggtcacgggggcgcagcggtggggtaagtacctgggg
ctgcaagtgggcgagatgtacctgatcacccatctgtcgcgggccggctggctgcgttgg
tcggacaagctcgcacccgcaccgctgaagcccggcaagggcccgatcgcgctgcgggtg
catcttgtcggagatgaaccgggccagaccgtcggtttcgacctgaccgaggcaggcacc
cagaaaaggcttgcggtgtgggtcgtccgggacccgatggatgtcccgcagattgccgcg
ctgggccccgacgccctgacactggggcccgaggacctcaaggaggtgctcgccgcgcac
ggcggacggatcaagacggtgatcaccgaccagaagatcatcgccggcatcggcaatgcc
tacagtgacgagatcctgcacgtggccaagctgtcacccttcgcgaccgccaacaagctg
tcggaggtgcagctggtcgacctgcacgatgcgatgtcctcggtgctcaccgatgcggtg
gcgcgttcggtggggcagcaggccgcgacgctcaagggggagaaacgttccgggttgcgc
gtgcacgcacgcaccgggctgccctgccccgtctgcggtgacacagtcgccgaagtctcc
ttcgtggacaagtccttccagtactgtcccacctgtcagaccggtggtaagaagctcgcc
gaccggagaatgtcgcgcttgctcaaatag
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