| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
mnf Microbacterium neungamense
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mnf00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JSY13_01980 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mnf03021]
JSY13_01980 (rpoC)
03400 DNA repair and recombination proteins [BR:mnf03400]
JSY13_01980 (rpoC)
Enzymes [BR:mnf01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JSY13_01980 (rpoC)
Transcription machinery [BR:mnf03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JSY13_01980 (rpoC)
DNA repair and recombination proteins [BR:mnf03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JSY13_01980 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
411470..415345
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| AA seq |
1291 aa
MLDATTFDELRIGLATADDIRGWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEEARHRDLATQENNIRLELKTLGDRRDAKIAARLAKLEEE
LAALEAEGAKADAKKKVKDAAEKEMAQIRKGADEAIAKLERVWEDFRTLEVGALRPEDDV
FHELQDRFGQYFEAHMGAEAIKKRLESFDLAGEAESLRLQIAEGKGQRKIRAIKRLKVVN
SFLETGMSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTLKEGAKGEGR
VFGSVSEAILAKDEGTLDLQAKVRIRIPGLTFLEGEAPEGYERHGLVDTSLGQAIFNDAL
PKGYPFVRGVADKSKLSQIVNKLAEEYPKVETAATLDRIKDAGFYWATRSGVTVALSDIL
TPPNKAEIVAGYEKQAAKVQAQYEKGLTTDAERRQELIKIWTEATDEVQAAMKAYFPADN
TINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGTR
KGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTTKGLELSIAAPNSQGELVRDANVE
NSVFARTLAADVVNEAGEVLASAGDDVGDVLIDKLVALGVENIKVRSVLTCDSAVGVCAQ
CYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELF
EARTPKGASPIAEADGRITIEETEKSKKVILTPDNGDEEVVYPVLKRATLLVEDGQHVTV
GQPLQVGTLDPKEVMRVMGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGDTNLLPGEMVDLKRYQQINREAVAEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKRDPLVGLKENVIIGKLIPAGTGLAKYRNITVEATEEAKSERYPNRI
FASDGAYAEGDFGYVDFDAFSTDDITPGSYN |
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| NT seq |
3876 nt +upstreamnt +downstreamnt
gtgctcgacgcaaccactttcgatgagcttcgaatcggccttgccactgctgacgacatc
cgcggatggtcgtacggcgaggtcaagaagcccgagacgatcaactaccgcacgctgaag
cccgagaaggacgggctcttcggcgagcagatcttcggcccctcccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtccgcttcaagggcatcgtgtgcgagcgctgcggcgtg
gaggtcaccaagagctccgtccgccgtgagcgcatgggccacatcgagctcgccgccccg
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctggggtacctgttggacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatggtgatctcggtggac
gaggaggcgcgtcaccgcgacctcgccacccaggagaacaacatccgcctcgagctgaag
acgctcggcgaccgccgcgacgcgaagatcgctgcccgcctggccaagctggaggaggag
ctcgccgctctcgaggcggagggcgccaaggccgacgcgaagaagaaggtcaaggacgcc
gccgagaaggagatggcgcagatccgcaagggcgccgacgaggcgatcgccaagctcgag
cgcgtgtgggaggacttccgcacgctcgaggtcggcgcgctgcgtcccgaggacgacgtc
ttccacgagctgcaggaccgcttcggccagtacttcgaggcgcacatgggcgccgaggcg
atcaagaagcgcctcgagtccttcgacctggccggcgaggccgagtcgctgcgcctgcag
atcgccgagggcaagggtcagcgcaagatccgcgcgatcaagcgcctgaaggtcgtgaac
tcgttcctggagaccggcatgagcccggccgccatggtgctcgacgtcgtcccggtgatc
ccgccggagctgcgtcccatggtgcagctggacggtggccgcttcgccacctccgacctg
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgtctgcgtcgcctgatcgacctc
ggcgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgtcgcggccgaccggtcaccggcaccggcaaccgcgccctgaag
tcgctcagcgacatgctcaagggcaagcagggccgtttccgtcagaacctgctcggaaag
cgcgtggactactcgggccgttcggtcatcgtcgtgggtccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagccgttcgtgatcaagcgcctc
atcgacctcggtcactcgcagaacatcaaggccgccaagcgcgccgtcgagcgcacccgt
cccgaggtgtgggacgtgctcgaggagatcatccgcgagcgcccggtgctgctgaaccgc
gcccccaccctgcaccgcctgggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagctgcacccgctcgtctgcgcggcgttcaacgcggacttcgacggcgaccag
atggccgtgcacctgccgctgtcggtggaggcgcaggccgaggcccgcatcctgatgctc
gcctcgaacaacatcctgaagccgtccgacggccgcccggtgaccctgccctcgcaggac
atgatcatcggcctgcaccacctgaccaccctgaaggagggtgcgaagggcgagggccgc
gtgttcggctcggtgtccgaggcgatcctcgccaaggacgagggcaccctcgacctgcag
gcgaaggtccgcatccgcatcccgggtctgacgttcctcgagggcgaggcccccgagggc
tacgagcgccacggcctcgtggacacctcgctcggccaggcgatcttcaacgacgcgctg
ccgaagggctacccgttcgtgcgcggcgtcgccgacaagagcaagctgtcgcagatcgtg
aacaagctcgccgaggagtacccgaaggtcgagaccgccgccacgctggaccgcatcaag
gacgccggcttctactgggccacccgttccggtgtgaccgtcgcgctcagcgacatcctc
accccgccgaacaaggccgagatcgtcgccggctacgagaagcaggccgcgaaggtccag
gcgcagtacgagaagggtctcaccaccgacgctgagcgtcgtcaggagctcatcaagatc
tggaccgaggcgaccgacgaggtccaggccgcgatgaaggcctacttcccggctgacaac
accatcaaccgcatggtgtcctcgggcgcccgtggtaactggctgcagatccgcaacatc
gcgggtatgcgcggtctggtgaacaacccgaagggtgagatcatcccgcgtccgatcatc
tcctcgtaccgcgagggtctgtcggtggcggagtacttcatcgcgacgcacggtacccgc
aagggtctggccgacaccgctctgcgcaccgccgactcgggttacctgacccgtcgtctg
gtggacgtctcgcaggatgtcatcatccgcgaggaggactgcggcacgaccaagggcctc
gagctgtcgatcgccgcgccgaactcgcagggcgagctggtgcgcgacgcgaacgtggag
aactcggtgttcgcccggacgctcgccgcggacgtggtgaacgaggccggcgaggtgctg
gcatccgccggcgacgatgtgggcgacgtgctcatcgacaagctggtcgcgctgggtgtc
gagaacatcaaggtccgctcggtgctgacctgcgactcggccgtcggcgtctgcgcgcag
tgctacggccgctcgctcgccactggcaagaccgtggacatcggcgaggccgtcggcatc
atcgccgcccagtcgatcggtgagcccggcacccagctgacgatgcgtaccttccacacc
ggtggttccgcgtcggcggacgacatcacccagggtctgccccgtgtgcaggagctcttc
gaggcgcgtaccccgaagggcgcctccccgatcgccgaggccgacggccgcatcacgatc
gaggagaccgagaagtcgaagaaggtcatcctgacgcccgacaacggcgacgaggaggtg
gtctacccggtgctgaagcgtgcgacgctcctcgttgaggacggccagcacgtcaccgtc
ggtcagccgctccaggtcggcacgctcgacccgaaggaggtcatgcgcgtcatgggtgcc
cgcgaggtgcagaagtacctcgtcggcggcgtgcagggcgtgtaccgctcgcagggtgtg
ccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcgcaaggtcacggtc
gtcgaccacggcgacacgaacctgctgccgggtgagatggtcgacctgaagcgctaccag
cagatcaaccgcgaggccgtggccgagggcaagcgccccgcctcgggccgtccggagctg
atgggtatcaccaaggcttcgctggcgaccgagtcctggctgtcggccgcgtccttccag
gagacgacccgcgtgctcacgcaggccgccatggagggcaagcgcgacccgctggtcggt
ctcaaggagaacgtcatcatcggtaagctcatcccggccggaaccggtctcgccaagtac
cgcaacatcacggtggaggcgaccgaggaggccaagagcgagcgctacccgaaccggatc
ttcgcatccgacggcgcgtacgccgagggcgacttcggctacgtcgacttcgacgcgttc
tcgacggacgacatcaccccgggctcgtacaactga |
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