Microbacterium neungamense: JSY13_02455
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Entry
JSY13_02455 CDS
T09212
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mnf
Microbacterium neungamense
Pathway
mnf03420
Nucleotide excision repair
mnf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JSY13_02455
03430 Mismatch repair
JSY13_02455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnf03400
]
JSY13_02455
Enzymes [BR:
mnf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JSY13_02455
DNA repair and recombination proteins [BR:
mnf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JSY13_02455
MMR (mismatch excision repair)
Other MMR factors
JSY13_02455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
UWF77938
LinkDB
All DBs
Position
511007..513463
Genome browser
AA seq
818 aa
AA seq
DB search
MIDAPLTVPASAPSQGGDPLLAGLNPQQLEAVTYRGKALLIVAGAGSGKTSVLTRRIALL
LRQREAWPSQILAITFTNKAAGEMRERVEALVGDSARGMWISTFHSACVRILRREAEQFG
FTRSFTIYDSGDSRALLKRLVKEHEGDAYGLTPASVQGRISKLKNELTDAEGHARQANLS
DPAERIFTEIFSDYQRALQKANAFDFDDLIAQTVFLFRAFPHVADTYRRRFRHILVDEYQ
DTNHAQYALIHELTRPVSGASSAAPEPYAMNGMMIFEPEPSGAEPGGPEDGASLTVVGDS
DQSIYAFRGADIRNITEFERDFPGAKVVLLEQNYRSTQNILSAANAVIGHNFDRKAKNLW
SDKGPGEKIVGFTGYSQHDEAQFVADEIEALHRAGMPYSEMAAFYRTNSQSRALEEIFIR
AAVPYKIMGGTKFYERAEIKDALAYLVAVANPADDMAVRRILNKPRRGIGEVTETAIARF
AEEHGISFRQALAHPGELGVGPKLQAAIAQLDAVLTEAAAVMTPASGEVPPATAVAEGLT
LLLSKSGYFDALRASRDPQDEARLENLDEFVAVARDFARNNPDGALVDFLTDVALVSDAD
DLDDASGAVSLMTMHTAKGLEYDAVFVTGVEEDLIPHRISAGEPGGPQEERRLFYVGITR
ARKRLHLSLAMTRAQFGEVSVAMPSRFLQEIPAELIDWRQSPEDVNSRGGMQSRALNARR
PGGGFGSGGDRFGAKPLPKSELKPLSTAMDKFANKVTSKVRDNGDLELAAGDRIRHDDFG
EGRVEAVTGDGAKRIAHVRFDTAGQKKLLIKIAPIVKL
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcgcccctcaccgttcccgcatccgccccgtcgcagggcggcgacccgctt
ctcgccgggctcaacccccaacagctcgaggcggtcacctaccgcggcaaggcgctgctc
atcgtcgccggcgccgggtcgggcaagaccagcgtgctcacccggcggatcgcgctgctg
ctgcgacagcgcgaggcgtggccgagtcagatcctggcgatcaccttcaccaacaaggcc
gcgggcgagatgcgcgagcgcgtcgaggcgctggtcggggattccgcgcgcggcatgtgg
atctccaccttccactccgcctgcgtgcggatcctgcggcgcgaggccgagcagttcggc
ttcacccgctccttcacgatctacgactccggcgactcgcgggcgctgctgaagcgtctg
gtcaaggagcacgagggggatgcgtacggcctcaccccggcatccgtgcaggggcgcatc
tcgaagctcaagaacgagttgacggatgccgaggggcacgcgcgtcaggcgaacctgagc
gacccggcggagcgcatcttcacggagatcttcagcgactaccagcgggcgctgcagaag
gcgaacgccttcgacttcgacgacctgatcgcgcagacggtgttcctgttccgggcgttc
ccgcacgtcgcggacacctaccggcgccgattccggcacatcctcgtcgacgagtaccag
gacaccaaccacgcccagtacgccctgatccacgagctcacccgcccggtgtcgggggca
tcctcggccgcacccgagccgtatgccatgaacggcatgatgatcttcgagccggagccg
tccggtgccgagccgggcggacccgaggacggcgcctcgctgaccgtcgtcggcgactcc
gaccagtccatctacgccttccgcggggcggacatccgcaacatcaccgagttcgagcgc
gacttcccgggcgcgaaggtggtgctgctggagcagaactaccggtccacgcagaacatc
ctctccgcggcgaacgccgtgatcgggcacaacttcgaccgcaaggcgaagaacctgtgg
agcgataagggcccgggcgagaagatcgtcggcttcaccgggtactcgcagcacgacgag
gcgcagttcgtcgcggacgagatcgaggcgctgcaccgcgccgggatgccgtactcggag
atggcggcgttctaccgcaccaactcgcagtcccgcgcactggaggagatcttcatccgc
gccgccgtgccgtacaagatcatgggcggcacgaagttctacgagcgtgccgagatcaag
gacgcgctggcctatctcgtcgcggtggcgaacccggccgacgacatggcggtgcgtcgc
atcctgaacaagccgcgccgaggcatcggcgaggtcaccgagacggcgatcgcgcgattc
gcggaggagcacggcatcagcttccgtcaggcgctggcgcatccgggtgagctgggcgtc
ggccccaagctgcaggcggccatcgcccagctggacgcggtgctcaccgaggccgctgcc
gtgatgacgccggcatccggggaggtgcctccggcgacggcggtcgccgaagggctcacc
ctgctgctgtccaagagcgggtacttcgacgcgctgcgtgccagccgcgacccgcaggac
gaggcgcggctggagaacctcgacgaattcgtcgccgtcgcgcgcgacttcgcccgcaac
aacccggacggtgcgctcgtggacttcctcaccgacgtcgcgctcgtatcggatgccgat
gacctcgacgacgcgtccggggcggtgtcgctgatgacgatgcacaccgcgaagggcctg
gagtacgacgcggtgttcgtcaccggcgtcgaggaggacctcatcccgcaccggatctcc
gccggcgaaccgggcgggccgcaggaggagcgccggctgttctacgtcggcatcacgcga
gcgcgcaagcgcctgcacctgtcgctggcgatgacccgggcgcagttcggcgaggtgtcg
gtggcgatgccgagccggttcctgcaggagatcccggccgagctgatcgactggcggcag
tcccccgaggacgtcaattcccgcggcggcatgcagtcccgcgcgctgaacgcgcgacgg
cccggcggcggcttcggatccggcggcgaccgtttcggcgcgaagccgctgccgaagagc
gagctcaagccgctgtcgaccgcgatggacaagttcgcgaacaaggtcacctcgaaggtg
cgcgacaacggcgacctggagctggccgccggcgaccgcatccggcacgacgacttcgga
gagggacgcgtcgaggcggtcaccggtgacggagccaagcgcatcgcacacgtgcggttc
gacaccgcgggccagaagaagctcctcatcaagatcgccccgatcgtcaagctctga
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