Microbacterium neungamense: JSY13_02555
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Entry
JSY13_02555 CDS
T09212
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mnf
Microbacterium neungamense
Pathway
mnf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JSY13_02555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnf03000
]
JSY13_02555
03400 DNA repair and recombination proteins [BR:
mnf03400
]
JSY13_02555
Enzymes [BR:
mnf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JSY13_02555
Transcription factors [BR:
mnf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JSY13_02555
DNA repair and recombination proteins [BR:
mnf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JSY13_02555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UWF77956
LinkDB
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Position
534959..536515
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AA seq
518 aa
AA seq
DB search
MSLPVMTFDERYRAISARDTRFDGQFVTAVRSTGIYCRPSCPARTPKPENVTFYPTSAAA
HEAGYRACKRCLPEAAPGSPEWNVRGDVAARAMRLIAAGIVEREGVPGLAARLGYSSRHL
TRLLTAELGAGPLALARAHRAHSARMLLVGTDMPISEVAFSAGFTSIRQCNDTIREVFGM
TPGDLRARRPRDAAGHDPVPGVIDLLLPHRPPLDAAGVFAWMAARALPGVESAGERSFAR
HLRMPGGPAWFEVARDERHRLRLRARVTRLGDLAPLVATARRLFDLDADPVAIDEALSAE
PALAPLVARTPGIRVPGAADPHEMLIRAMVGQQITVVAARSALTALVEALGERVGDTTGP
ADAAAPAATPDSGILFPTMAAIAEHGASVLRGPAARIRAITGAAAALAAGELVLTVGDDA
AAQRAALLAMPGIGPWTADYVRMRVLGDPDVLLPGDVAVRAGAAATGLPADPAGLAAWAE
RTAPWRSYLTAHLWRSAPAKRTPRSSAAAAAALTKEPS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcccggtgatgaccttcgacgagcggtatcgcgccatcagcgcgcgcgacacc
cgcttcgacgggcagttcgtcaccgccgtgcgctccaccggcatctactgccgtcccagc
tgcccggcacgcacgccgaagccggagaacgtgaccttctacccgaccagcgccgccgcg
cacgaggcgggctaccgcgcctgcaagcgctgcctgcccgaggccgcgccgggctcgccg
gagtggaacgtccgcggtgatgtggccgcccgcgccatgcggctgatcgcggccggcatc
gtggaacgcgagggcgtccccggtctcgccgcccggctgggatactcctcccgccacctc
acccggctgctcaccgccgaactcggggccggcccgctcgccctcgcccgtgcgcatcgc
gcgcacagcgcccggatgctgctggtgggcaccgacatgccgatctcggaggtggccttc
tcggccggcttcaccagcatccggcagtgcaacgacaccatccgcgaggtgttcgggatg
accccgggcgacctgcgcgcccgccgtccccgggacgcggccgggcacgatcccgtcccc
ggggtgatcgacctgctcctgccgcaccgcccgccgctggacgccgccggcgtgttcgcc
tggatggccgcgcgtgcgctgcccggcgtggagagcgccggcgagcgctccttcgcccgt
cacctgcggatgcccggcggccccgcctggttcgaggtcgcccgggacgagcgccaccgg
ctccggctgcgcgcccgcgtcacccgcctcggagatctcgcaccgctggtcgccaccgcc
cgccggctgttcgacctggatgccgacccggtcgccatcgacgaggcgctctcggcggag
ccggcgctggccccgctggtggcgcgcacgcccggcatccgggtgccgggagcggcggac
ccgcacgagatgctgatccgcgccatggtcggtcagcagatcaccgtcgtggccgcgcgc
agcgccctcaccgcgctcgtcgaggcgctgggcgagcgggtcggcgacaccaccgggccc
gctgatgcggccgcaccggcagcgaccccggactccggcatcctgttcccgaccatggcc
gcgatcgccgagcacggggcatccgtgctgcgcggacccgccgcccgcatccgcgccatc
accggcgccgccgccgcgctcgccgcgggagagctcgtcctcaccgtcggagacgacgcg
gccgcgcagcgcgccgcactgctggcgatgcccgggatcgggccgtggaccgccgactac
gtgcggatgcgcgtgctcggcgaccccgacgtcctgctccccggggacgtcgccgtgcgg
gccggcgcggcggccaccggcctccccgccgacccggccgggctcgcggcctgggccgag
cgcacggcgccctggcgcagctacctcaccgcgcatctgtggcgctcggcgcccgcgaag
cgcacccctcgatcctccgcggccgccgccgccgcgctcacgaaggagccctcatga
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