Microbacterium neungamense: JSY13_03735
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Entry
JSY13_03735 CDS
T09212
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mnf
Microbacterium neungamense
Pathway
mnf03420
Nucleotide excision repair
mnf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JSY13_03735
03430 Mismatch repair
JSY13_03735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnf03400
]
JSY13_03735
Enzymes [BR:
mnf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JSY13_03735
DNA repair and recombination proteins [BR:
mnf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JSY13_03735
MMR (mismatch excision repair)
Other MMR factors
JSY13_03735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UWF78153
LinkDB
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Position
789349..791070
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AA seq
573 aa
AA seq
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MSALDALDERQREAASVLRGPVAVLAGAGTGKTRVITHRIAHGVDTGAYSPSRVMAVTFT
AKAAGELRGRLRALGVEGVAARTFHSAALAQLNFFWPTIAGDTAPAIVDNKVRLLGQAAD
GLRLRLSTATLRDVAAEIEWRKVSMLSIDRYAEQNRPISGIRPEQLVDLQRAYEALKDER
RQLDFEDVLLACAGMLEAEPRVARAVHEQYRHFTVDEYQDVSPLQNRLLELWLGDRRDLC
VVGDASQTIYSFAGAQQRFLLEFERRFPDATVVRLETNYRSRAPILAAANALMRGRPGAL
DLVPAREDFSAEPPTLTVFDTETEEAEGVAAAVAARIAGGTSPSDIAVLYRAHAQSAVLQ
QALAAQGVATTVLGGTRFFDMPEVRQAVLALRGAAVAPTDLGFLPAVRDVLRGLGLTDEP
PAAGGAQRDGWEARRAILRLAEEAPEGTTLRSFADALMARAKDQHEPTLRTVTLSTLHAA
KGLEWPHVHVIGWAEGALPISYATTFEQIDEERRLAYVGITRAARTLSLSWARSAGRGER
APSRFLAEIGTTGRGTGILREVPPRAMSGVRRG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcactggacgccctcgacgaacggcagcgcgaggccgcctccgtgctgcgcggc
ccggtcgccgtgctcgccggtgccggcaccgggaagacgcgggtgatcacccaccgcatc
gcgcacggcgtcgacaccggcgcctactcgccctcgcgcgtgatggcggtgaccttcacc
gccaaagccgccggcgagctgcgcggccggctgcgtgcgctcggcgtcgagggcgtcgcc
gcgcggacgttccactccgcggctctggcgcagctgaacttcttctggcccacgatcgcc
ggcgacaccgcccccgcgatcgtcgacaacaaggtgcgcctgctcggccaggccgcggac
gggctgcggctgcgcctgagcaccgcgaccctgcgcgacgtggcggccgagatcgaatgg
cgcaaggtgtcgatgctctccatcgaccggtacgccgagcagaaccgcccgatcagcggc
atccgcccggagcagctcgtggacctgcagcgcgcctacgaggcgctcaaggacgagcgc
cgtcagctcgacttcgaggacgtgctgctcgcctgcgccggcatgctggaggcggagccg
cgcgtggcccgcgccgtgcacgagcagtaccggcacttcacggtggacgagtaccaggac
gtgtcgccgctgcagaaccggctgctcgagctgtggctcggcgaccgccgcgacctctgc
gtcgtgggcgacgccagccagaccatctactccttcgccggcgcgcagcagcgcttcctg
ctcgagttcgagcggcgcttcccggatgccaccgtggtgcgcctggagacgaactaccgc
tcccgcgcgccgatcctcgccgcggcgaacgcgctgatgcgcggccgtccgggcgcgctc
gacctggtgccggcgcgggaggacttctcggccgagcccccgacgctgaccgtgttcgac
acggagacggaggaggcggagggcgtggccgcggccgtcgccgcgcgcatcgccggcggc
acctccccctcggacatcgcggtgctctaccgggcgcacgcccagtcggccgtgctgcag
caggcgctcgccgcgcagggcgtcgcgacgaccgtgctcggcggcacccggttcttcgac
atgcccgaggtgcgccaggccgtgctggcgctgcgcggcgccgcggtcgcgcccaccgat
ctcggcttcctgcccgcggtgcgcgacgtgctgcgcggcctcgggctcaccgacgagccc
cccgcggcgggcggggcgcagcgcgacggctgggaggcgcgacgcgcgatcctgcggctc
gcggaggaggcgccggagggcaccacgctgcgctccttcgcggacgcgctgatggcgcgc
gcgaaggaccagcacgagccgaccctgcgcaccgtgacgctgtcgaccctgcacgcggcg
aagggcctggagtggccgcacgtgcacgtgatcggctgggctgagggcgcgctgccgatc
tcctacgccacgaccttcgagcagatcgacgaggagcgccgcctcgcgtacgtgggcatc
acgcgggccgcgcgtacgctgtcgctgtcgtgggcgcggtccgccggcagaggggagcgg
gcgccgtcgcgcttcctcgcggagatcgggaccaccggccgcggcacgggcattcttcgt
gaggtgccaccgcgcgccatgtccggcgtccgccggggctga
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