Microbacterium neungamense: JSY13_04430
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Entry
JSY13_04430 CDS
T09212
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mnf
Microbacterium neungamense
Pathway
mnf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JSY13_04430 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnf03021
]
JSY13_04430 (rho)
03019 Messenger RNA biogenesis [BR:
mnf03019
]
JSY13_04430 (rho)
Transcription machinery [BR:
mnf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JSY13_04430 (rho)
Messenger RNA biogenesis [BR:
mnf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JSY13_04430 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
AAA_22
VWA_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
UWF78628
LinkDB
All DBs
Position
936581..938587
Genome browser
AA seq
668 aa
AA seq
DB search
MTEAPVRKRAPRRATSASAAADAAPAAAPSAETPAAPASDAAASPAAAGSSATAAESSAD
AAEEKPKAKAPRRTRAKKADAEAAAVPASEAPASDTAAADTAISAEAAPAGETAERAGDA
PAKRPARGRRSKAQDADKAKDADKAQGAEASGADAAGETTAGQKPADAAAAEAATGDAKQ
ADGKQADGKQAEARQGEGKQGDASEKPEADGDEGEGGGRGRGRNRNRSRGRGQNGGGQAQ
QPQAEEEQAGGRTRQRNKRRGGGNVTADEFETEIGEDDVLIPIAGILDVLDNYAFVRTSG
YLPGATDVYVSLGQVKKYNLRKGDAIVGAIKQPREGEQQGRQKYNALVKVDSINGLSPED
AGNRVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQ
QIANAIAQNNPEVHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPAEDHTTVAELAIER
AKRLVELGRDVVVLLDSITRLGRAYNISAPASGRVLTGGVDASALYPPKRFFGAARNIEN
GGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRALADKRIFPAVDVNASSTRREE
MLLSPDEVKITWKLRRALAGLDPQQALEVVLGKLKETGSNVEFLFQMQKSIPAPPATGSG
HGHENNIR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaagcaccggtgcgcaagcgcgcaccccggcgcgcgaccagcgcatccgccgcc
gcggatgccgcgcctgcggcggcgccgtccgccgagacgccggcggctccggcatccgac
gccgctgcctcccctgctgcggccggctcctccgcgaccgccgcggagtcgagcgcggac
gctgccgaggagaagccgaaggccaaggcgccgcgccgtacgcgggcgaagaaggcggat
gccgaggcggccgccgttccggcatccgaggcaccggcgtccgacacggcggcagccgac
accgcgatctctgccgaggccgcgccggccggcgagacggccgagcgcgccggcgacgcc
ccggccaagcgccccgcgcgcggtcgccgcagcaaggcgcaggacgccgacaaggcaaag
gacgccgacaaggcccagggcgctgaggcatccggcgccgacgcggcaggcgagacgacc
gccgggcagaagccggccgacgccgccgcggcggaagcagcaaccggcgacgcgaagcag
gccgacggcaagcaggcggacggcaagcaggcagaagcccggcagggcgagggcaagcag
ggcgacgcgtccgagaagcccgaggccgacggcgacgagggcgagggcggcggccgcggt
cgtggccgcaaccgcaaccgcagccgcgggcgcggccagaacggcggcgggcaggcccag
cagccccaggccgaggaggagcaggccggcggtcgcacgcgtcagcgcaacaagcgacgc
ggcggcggcaacgtcaccgcggacgagttcgagaccgagatcggcgaggacgacgtcctc
atcccgatcgcgggcatcctcgacgtgctcgacaactacgccttcgtccgcaccagcggc
tacctgcccggcgcgaccgacgtgtacgtctcgctcggccaggtgaagaagtacaacctg
cgcaagggcgacgcgatcgtcggcgccatcaagcagccgcgcgagggcgagcagcagggg
cgtcagaagtacaacgccctggtgaaggtcgactccatcaacggcctgtcgcccgaggac
gccggcaaccgcgtcgagttcggcaagctcaccccgctgtacccgcaggagcgcctgcgt
ctggagaccgcgccggagaagctgacccagcggatcatcgacctggtcgccccgatcggc
aagggccagcggggcctgatcgtggcgccgccgaaggccggcaagaccatcgtgctgcag
cagatcgcgaacgcgatcgcgcagaacaaccccgaggtgcacctcatggtcgtgctcgtc
gacgagcgcccggaagaggtcaccgacatgcagcgctcggtgaagggcgaggtcatcgcc
tcgaccttcgaccgccccgcggaggaccacaccaccgtcgccgagctcgccatcgagcgc
gccaagcgcctggtggagctgggccgggacgtggtcgtgctgctcgactcgatcacccgc
ctcggccgcgcctacaacatctccgcgccggcatccggccgcgtgctcaccggcggtgtg
gacgcctcggcactgtacccgccgaagcggttcttcggcgcggcgcgcaacatcgagaac
ggcggatcgctgaccatcctcgccaccgccctcgtggagaccggctccaagatggacgag
gtgatcttcgaggagttcaagggcaccggcaacagcgagctgcgcctgtcccgcgccctg
gccgacaagcggatcttcccggcggtcgacgtgaacgcgtccagcacccgccgcgaggag
atgctgctctccccggacgaggtcaagatcacatggaagctgcgccgcgccctcgccggt
ctcgacccgcagcaggcgctcgaggtggtcctcggcaagctcaaggagaccggctccaac
gtcgagttcctgttccagatgcagaagtcgatcccggccccgccggcgaccggctccggc
cacgggcacgagaacaacatccgctga
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