Microbacterium neungamense: JSY13_04855
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Entry
JSY13_04855 CDS
T09212
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mnf
Microbacterium neungamense
Pathway
mnf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JSY13_04855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnf03019
]
JSY13_04855
03016 Transfer RNA biogenesis [BR:
mnf03016
]
JSY13_04855
Enzymes [BR:
mnf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JSY13_04855
Messenger RNA biogenesis [BR:
mnf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JSY13_04855
Transfer RNA biogenesis [BR:
mnf03016
]
Prokaryotic type
tRNA degradation factors
JSY13_04855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_KhpA-B
KH_NusA_1st
KH_PNO1_2nd
KH_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UWF78341
LinkDB
All DBs
Position
1028096..1030369
Genome browser
AA seq
757 aa
AA seq
DB search
MEGPEITATEAVLDNGRFGTRTIRFETGRLAQQAQGSVAAYLDGETMLLSATSVSKQPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVITVLSIAPGEFYDALAINAASASTQISGLPFSGPIAGVRLALIPGHGENADQWVAFPN
AEQVEQAVFDLVVAGRVITKADGSEDVAIMMVEAEATENSWNLIKAGAVKPSEEVVAQGL
EAAKPFIAQLVKAQAELAATASKEPGVYPVFPAYSQEVYDFVAERAYAELSDVYQIADKQ
QRQNADDAIKDRVRAELIEATEAGNLPAAAPLEFSAAYKSVTKKIVRGRILTENVRIDGR
GLADIRPLDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPTTSKRYMHH
YNFPPYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALGSNGSTS
MGSVCASTLSLLNAGVPLRAPVAGIAMGLVSDEVDGETRYAALTDILGAEDALGDMDFKV
AGTAEFVTAIQLDTKLDGIPSEVLAGALTQARDARLTILNVLNAAIDSPDEMAPTAPRVI
SVQIPVDKIGELIGPKGKTINAIQDETGAQISIEEDGTVYIGATDGPSAEAARAQVNAIA
NPTNPEVGEQFLGTVVKIATFGAFVSLLPGKDGLLHVTEVRKLAGGKRVENVEDVLSVGQ
KILVRITKIDDRGKLSLEPVLDDAPAEEAPAEEPAEA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtcctgaaatcaccgccaccgaggccgttctcgacaacggccgcttcggcacc
cgcaccatccgcttcgagaccggacgcctcgcccagcaggcgcagggctcggtggcggcc
tacctcgacggcgagaccatgctgctgtcggcgacctccgtgagcaagcagccgcgcgag
ggcttcgacttcttcccgctgacggtcgacgtcgaggagcgctcctacgccgccggcaag
atccccggctcgttcttccgccgcgagggccgcccctccaccgaggcgatcctggtgtgc
cgtctcatcgaccgcccgctgcgcccgtcgttcgtcgacggcctgcgcaacgaggtgcag
atcgtcatcaccgtcctctcgatcgccccgggcgagttctacgacgcactggcgatcaac
gccgcctcggcgtccacgcagatctccggtctgccgttctccggccccatcgccggtgtc
cgcctcgcgctcatccccggtcacggcgagaacgccgaccagtgggtcgcgttcccgaac
gccgagcaggtggagcaggccgtgttcgacctcgtcgtcgccggccgcgtgatcaccaag
gcagacggctccgaggacgtcgcgatcatgatggtcgaggccgaggcgaccgagaacagc
tggaacctcatcaaggccggcgccgtcaagcccagcgaggaggtcgtcgcgcagggcctg
gaggccgccaagccgttcatcgcccagctggtgaaggcgcaggccgagctcgccgcgacc
gcgtcgaaggagcccggcgtgtacccggtgttcccggcgtacagccaggaggtctacgac
ttcgtggccgagcgcgcctacgccgagctcagcgacgtctaccagatcgccgacaagcag
cagcgccagaacgccgacgacgcgatcaaggaccgtgtccgcgccgagctcatcgaggcc
accgaggccgggaacctgcccgccgccgcgccgctggagttctccgcggcgtacaagtcg
gtcaccaagaagatcgtccgcggtcgcatcctcaccgagaacgtccgcatcgacggccgc
ggcctcgccgacatccgtccgctcgacgccgaggtccaggtgatcccgcgcgtgcacggc
tcggccatcttccagcgcggcgagacccagatcctgggtgtcaccacgctgaacatgctc
aagatggagcagcagatcgactcgctgtcgcccaccacgagcaagcgctacatgcaccac
tacaacttcccgccctactccaccggtgagaccggccgggtcgggtcgccgaagcgtcgc
gagatcgggcacggcttcctcgccgagcgcgccctcgtgccggtgctgcccagccgcgag
gagttcccgtacgcgatccgccaggtgtccgaggctctcggctccaacggctccacctcg
atgggctcggtctgcgcgtccacgctgtcgctgctgaacgccggtgtgccgctgcgcgcc
ccggtggccggcatcgcgatgggcctggtctccgacgaggtcgacggcgagacccgctac
gcggcgctcaccgacatcctcggcgccgaggacgctctcggcgacatggacttcaaggtg
gccggcaccgccgagttcgtcaccgcgatccagctggacaccaagctcgacggcatcccc
tccgaggtgctcgccggcgcgctgacccaggcccgcgacgcgcgcctgaccatcctgaac
gtgctcaacgcggcgatcgactccccggatgagatggcgccgaccgctccgcgcgtgatc
agcgtgcagatcccggtcgacaagatcggcgagctgatcggcccgaagggcaagacgatc
aacgccatccaggacgagaccggcgcgcagatctccatcgaggaggacggcaccgtctac
atcggcgcgaccgacggcccctcggccgaggccgcccgcgcccaggtgaacgcgatcgcc
aaccccaccaacccggaggtcggcgagcagttcctgggcaccgtggtgaagatcgccacg
ttcggcgccttcgtctcgctgctgcccggcaaggacggcctgctgcacgtcaccgaggtg
cgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtcctctccgtcggccag
aagatcctggtgcgcatcacgaagatcgacgaccgcggcaagctgtccctcgagccggtg
ctcgacgacgcccccgccgaggaggccccggccgaagagccggccgaggcctga
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