Microbacterium neungamense: JSY13_06780
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Entry
JSY13_06780 CDS
T09212
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mnf
Microbacterium neungamense
Brite
KEGG Orthology (KO) [BR:
mnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnf03019
]
JSY13_06780
Enzymes [BR:
mnf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JSY13_06780
Messenger RNA biogenesis [BR:
mnf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JSY13_06780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
MTR4_beta-barrel
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UWF76594
LinkDB
All DBs
Position
complement(1414222..1416696)
Genome browser
AA seq
824 aa
AA seq
DB search
MSTPAERYAAASAAAEHPRTTEFAARQRFALDPFQIAACHALERGRSVLVAAPTGAGKTI
VGEFAIHLAMQTPNDKAFYTTPMKALSNQKFRELVDVYGPDDVGLLTGDTNINGNARIVV
MTTEVLRNMLYADSDALRGLRYVVMDEVHYLADRFRGPVWEEVILHLPPSVRLISLSATV
SNAEEFGDWLDTVRGDTDVIVSETRPVPLEQHVLVRDDLLPLFDDRAGIATAQVNQELFR
IRSFTGSRYDENRRAQEHRSARHGGRDAHRPPRGGRRPVRAGNIRRIERMDRPDVVQLLE
RSNLLPAIFFIFSRVGCDAAVDQVRRAGLRLTTPEERAEIREIVEDRTRALLDEDLAVLG
FWQWRDDLERGVAAHHAGLLPAFKEVVEELFQRKLIKVVFATETLALGINMPARTVVLEK
MEKFNGEARVAITSGEYTQLTGRAGRRGIDVEGHAVVQWSEGMDPQAVAALASRRTYPLN
SSFRPTYNMAVNLIDRFGRARAREILESSFAQFQADRAVVGLARKVRDAEESLAGYLKAM
ECEHGDFAEYAGIRRELSDMEKKNRQDAAGPRSIRDKRLRKIQSLRTRMQRHPCHRCPDR
EAHARWAERYWKLKRETDRMRRQIETRTGTVARIFDRVIDVLEVLEYVSGSGDELQLTDA
GRTMRRIYGERDLLVAESLRQNLWRSLDAPSLAAMASCLVYEPRRDEQNAGERGLPRGAF
RIAYDSTARLWAELDEIEKERGLSGTEPLAPGLAAAMHAWARGASLDRVLIEADMAAGDF
VRWAKQTIDLLDQLSIVAEDGDLARTARRALDGVRRGIVAYSAV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccccggccgagcgctacgccgccgcgagcgccgcggccgagcatccgcggacc
accgagttcgccgcgcggcagcgcttcgccctcgacccgttccagatcgccgcgtgtcac
gccctggagcgcggccgcagcgtgctcgtcgcggcgcccaccggggccggcaagaccatc
gtcggggagttcgcgatccacctggcgatgcagacgccgaacgacaaggcgttctacacc
acgccgatgaaggccctgtcgaaccagaagttccgcgagctggtcgacgtctacggcccc
gacgacgtcggtctgctcaccggcgacaccaacatcaacggcaacgcgcgcatcgtggtg
atgaccaccgaggtgctgcgcaacatgctgtacgccgactccgacgcgctgcgcgggctg
cgctacgtcgtcatggacgaggtgcactacctcgccgaccgcttccgcggacccgtctgg
gaggaggtgatcctgcacctgccgcccagcgtgcggctgatctcgctcagcgccaccgtc
tccaacgccgaggagttcggcgactggctggacacggtccgcggcgacaccgacgtcatc
gtctcggagacccggccggtgcccctggagcagcacgtgctcgtccgggacgacctgttg
ccgctgttcgacgaccgcgccggcatcgccacggcccaggtgaaccaggagctgttccgc
atccgctccttcaccggctcccgctacgacgagaaccggcgtgcgcaggagcatcgcagc
gcacggcacggcggcagggacgcgcaccgcccgccgcgcggcggccggcgtccggtgcgc
gccggcaacatccgccgcatcgagcgcatggaccgaccggacgtcgtccagctgctggag
cgctcgaacctcctgcccgcgatcttcttcatcttcagcagggtcggatgcgacgccgcc
gtcgaccaggtgcgccgcgccggcctgcggctgacgacgccggaggaacgcgcggagatc
cgcgagatcgtggaggaccgcacccgcgccctgctcgacgaggacctcgccgtgctcggc
ttctggcagtggcgggacgacctcgagcgcggtgtcgcggcgcatcacgccggcctgctg
ccggcgttcaaggaggtcgtcgaggagctgttccagcgcaagctgatcaaggtcgtcttc
gccaccgagaccctcgccctcggcatcaacatgccggcgcgcaccgtcgtgctggagaag
atggagaagttcaacggcgaggctcgggtcgcgatcacgtcgggggagtacacccagctc
accggccgggccggacgccgcggcatcgacgtcgaaggccacgccgtcgtgcagtggagc
gagggcatggacccccaggccgtcgccgcgctggcgtcccgacggacgtatccgctcaac
tccagcttccgcccgacgtacaacatggccgtgaacctcatcgaccggttcggccgcgcc
cgggcccgcgagatcctggagtcctcgttcgcccagttccaagccgaccgcgcggtcgtc
ggcctggcacgcaaggtgcgggacgccgaggaatcgctcgccgggtacctgaaggccatg
gagtgcgagcacggcgacttcgccgagtacgccggcatccggcgcgagctcagcgacatg
gagaagaagaaccgtcaggatgcggccggcccgcgctcgatccgcgacaagcggctccgc
aagatccagagcctgcgcacccggatgcagcggcacccctgccaccgctgcccggaccgc
gaggcgcacgcccgctgggcggagcggtactggaagctcaagcgcgagaccgaccggatg
cggcgccagatcgagacgcgcaccggcaccgtggcgcgcatcttcgaccgcgtgatcgac
gtgctcgaggtgctcgagtacgtctccggcagcggcgacgagctgcagctgacggatgcc
gggcgcacgatgcgccgcatctacggggagcgcgacctcctggtcgccgaatcgctgcgc
cagaacctgtggcgcagtctggacgccccgtcgctggccgcgatggcgagctgcctggtg
tacgaaccgcgccgggacgagcagaacgcgggggagcgggggctgccccgcggcgccttc
cggatcgcgtacgacagcacggcccggctgtgggccgagctcgacgagatcgagaaggag
cgcggactctccggcaccgagccgctcgccccaggactggccgccgcgatgcacgcctgg
gcgcgcggggcgtcgctggaccgcgtgctgatcgaggccgacatggccgcgggcgacttc
gtgcgctgggcgaagcagaccatcgacctgctcgaccagctgtccatcgtcgcggaggac
ggcgacctggcccgcaccgcgcgccgcgccctggacggcgtgcgtcgcgggatcgtcgcc
tacagcgcggtatga
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