Microbacterium neungamense: JSY13_06950
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Entry
JSY13_06950 CDS
T09212
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mnf
Microbacterium neungamense
Pathway
mnf03030
DNA replication
mnf03430
Mismatch repair
mnf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JSY13_06950
03430 Mismatch repair
JSY13_06950
03440 Homologous recombination
JSY13_06950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnf03032
]
JSY13_06950
03400 DNA repair and recombination proteins [BR:
mnf03400
]
JSY13_06950
Enzymes [BR:
mnf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JSY13_06950
DNA replication proteins [BR:
mnf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JSY13_06950
DNA repair and recombination proteins [BR:
mnf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JSY13_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UWF76621
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All DBs
Position
1453334..1454050
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AA seq
238 aa
AA seq
DB search
MTHAAQLPSWITRVGVFDLETTGVDVTADRIVTAHVGVLDARGREIAARDWLADPGVEIP
EGAAAVHGITTAHARAHGRPAAQVVAEITRALRTLLAQGLPIVAYNASYDFSLLAHEARR
HGVPELVDPAPVIDPFVIDKAYDRYRPGKRTLEIVAAHYAVGLDAAHEASADAVAAGRVA
QALARRFPLPDSPVELHTRQIAWARAQASSLTEYFIRIGRLDPEQTVDGTWPVRGESA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgcagcgcagctcccgtcctggatcacccgggtcggcgtgttcgacctggag
acgaccggtgtcgacgtgaccgccgaccgcatcgtcaccgcccacgtcggcgtgctcgac
gcccgcgggcgggagatcgccgcgcgggactggctggccgatcctggggtggagatcccg
gagggcgccgcagcggtgcacggcatcaccacggcgcacgcccgggcgcacggcaggccg
gcggcccaggtcgttgccgagatcacccgggcgctgcgcaccctgctcgcgcagggcctg
cccatcgtggcgtacaacgcgtcgtacgacttctccctgctcgcgcacgaggcacggcgg
cacggtgttccggagctggtggatcccgcgccggtgatcgacccgttcgtgatcgacaag
gcctacgaccgctaccggccggggaagcgcacgctcgagatcgtggccgcgcactacgcg
gtcggactggacgccgcacacgaggcgtccgcggatgcggtcgccgcggggcgcgtggcg
caggctctcgcccgccggttcccgctgccagactcgccggtcgagctgcacacccggcag
atcgcgtgggcgcgggcgcaggcgtccagcctgaccgaatacttcatcaggatcggccgg
ctggacccggaacagaccgtggacggcacctggccggtccgcggggaatccgcctga
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