KEGG   Microbacterium neungamense: JSY13_07980
Entry
JSY13_07980       CDS       T09212                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mnf  Microbacterium neungamense
Pathway
mnf00010  Glycolysis / Gluconeogenesis
mnf00020  Citrate cycle (TCA cycle)
mnf00260  Glycine, serine and threonine metabolism
mnf00280  Valine, leucine and isoleucine degradation
mnf00310  Lysine degradation
mnf00380  Tryptophan metabolism
mnf00620  Pyruvate metabolism
mnf00630  Glyoxylate and dicarboxylate metabolism
mnf00640  Propanoate metabolism
mnf00670  One carbon pool by folate
mnf00785  Lipoic acid metabolism
mnf01100  Metabolic pathways
mnf01110  Biosynthesis of secondary metabolites
mnf01120  Microbial metabolism in diverse environments
mnf01200  Carbon metabolism
mnf01210  2-Oxocarboxylic acid metabolism
mnf01240  Biosynthesis of cofactors
Module
mnf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mnf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mnf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mnf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mnf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JSY13_07980 (lpdA)
   00020 Citrate cycle (TCA cycle)
    JSY13_07980 (lpdA)
   00620 Pyruvate metabolism
    JSY13_07980 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    JSY13_07980 (lpdA)
   00640 Propanoate metabolism
    JSY13_07980 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JSY13_07980 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    JSY13_07980 (lpdA)
   00310 Lysine degradation
    JSY13_07980 (lpdA)
   00380 Tryptophan metabolism
    JSY13_07980 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JSY13_07980 (lpdA)
   00670 One carbon pool by folate
    JSY13_07980 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mnf04147]
    JSY13_07980 (lpdA)
Enzymes [BR:mnf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JSY13_07980 (lpdA)
Exosome [BR:mnf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JSY13_07980 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_binding_3 Thi4 HI0933_like FAD_oxidored NAD_binding_8 3HCDH_N Lys_Orn_oxgnase DAO AlaDh_PNT_C ApbA Glu_dehyd_C 2-Hacid_dh_C ThiF
Other DBs
NCBI-ProteinID: UWF76794
LinkDB
Position
1665035..1666432
AA seq 465 aa
MPHYDVVILGAGPGGYVAAVRSAQLGLSTAIIEEKYWGGVCLNVGCIPSKALLKNAELAH
TLKHKADFFGISGEFTIDYGKAWDRSRVVADGRVKGIHFLMKKNKVTEYEGRGTFTGPKA
ISVAKKDGSTEEVTFDNVIIATGSTVRLLPGVQLSDNVVTYEEQILSRELPESIVIVGAG
AIGMEFAYVMSNYGVKVTIIEFLDRALPNEDADVSKEITKQYKNYGIEILTSTKVESVVD
NGSSVTVTYTGKDGQQGSIEAGKVLMSVGFAPNVNGYGLENTGVKLTERGAIEIDDHMRT
NVEGIYAIGDVTAKLQLAHVAEAQAVVAAETIGNAETMTLGDYRMMPRATFCSPQVASFG
LTEQQAKDEGREIKVATFPFMANGKAHGLGEPVGFVKLIADAEHLELIGAHMVGPDVSEL
LPELTLAQKWDLTALELARNVHTHPTLSEALQEGFHGLAGHMINF
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgccacactacgatgtcgtcatcctcggcgcgggccctggcggctacgtcgccgccgtc
cgcagcgcccagctcggcctgtccaccgccatcatcgaggagaagtactggggtggtgtg
tgtctgaacgtgggctgcatcccctccaaggccctcctgaagaacgccgaactcgcgcac
accctgaagcacaaggccgacttcttcggcatctcgggtgagttcacgatcgactacggc
aaggcgtgggaccgcagccgcgtcgtcgcggacggccgggtcaagggcatccacttcctg
atgaagaagaacaaggtcaccgagtacgagggccgcggcaccttcaccggcccgaaggcc
atctcggtggccaagaaggacggctccaccgaggaggtcaccttcgacaacgtcatcatc
gccaccggctccacggtccgcctgcttccgggtgtgcagctcagcgacaacgtcgtcacc
tacgaggagcagatcctctcccgggagctccccgagtcgatcgtcatcgtcggcgccggc
gccatcggcatggagttcgcctacgtcatgtcgaactacggcgtgaaggtgacgatcatc
gagttcctcgaccgcgcgctccccaacgaggacgcggacgtgtcgaaggagatcaccaag
cagtacaagaactacggcatcgagatcctcacgtccaccaaggtggagtccgtggtcgac
aacggctcgtcggtcaccgtcacctacaccggcaaggacggccagcagggctcgatcgag
gccggcaaggtgctcatgtcggtcggcttcgctccgaacgtgaacggctacggcctggag
aacaccggcgtcaagctcaccgagcgcggcgccatcgagatcgacgaccacatgcgcacc
aacgtcgagggcatctacgccatcggcgacgtcaccgcgaagctgcagctcgcccacgtg
gccgaggcgcaggcggtcgtcgcggcggagaccatcggcaacgccgagacgatgacgctg
ggcgactaccggatgatgccgcgggcgacgttctgctcgccgcaggtcgcctcgttcggt
ctcaccgagcagcaggcgaaggacgagggccgcgagatcaaggtcgcgaccttcccgttc
atggccaacggcaaggcgcacggcctgggcgagccggtcggcttcgtgaagctcatcgcg
gacgccgagcacctcgagctgatcggtgcgcacatggtcggcccggacgtgtcggagctc
ctgcccgagctgaccctggcccagaagtgggacctcaccgctctggagctggcccgcaac
gtgcacacccacccgacgctgtcggaggcgctgcaggagggcttccacggcctcgccggt
cacatgatcaacttctga

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